RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 FAM129BQ96TA1 746 aa6.34□□□□□ -1.4
THUMPD3P1-201ENST00000506556 BRD7Q9NPI1 651 aa6.34□□□□□ -1.4
THUMPD3P1-201ENST00000506556 PCDHGC4Q9Y5F7 938 aa6.34□□□□□ -1.4
THUMPD3P1-201ENST00000506556 OPLAHO14841 1288 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NEFLP07196 543 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ITGA6P23229 1130 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 FOXR1Q6PIV2 292 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NUDT16Q96DE0 195 aaKnown RBP6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ZCCHC2Q9C0B9 1178 aaKnown RBP6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 PHF24Q9UPV7 400 aa6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 RTCBQ9Y3I0 505 aaKnown RBP6.33□□□□□ -1.4
THUMPD3P1-201ENST00000506556 FGD1P98174 961 aa6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NPAS4Q8IUM7 802 aa6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ALKBH8Q96BT7 664 aaKnown RBP6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 KLRG1Q96E93 195 aa6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 BCL11AQ9H165 835 aa6.32□□□□□ -1.4
THUMPD3P1-201ENST00000506556 KCNQ4P56696 695 aa6.31□□□□□ -1.4
THUMPD3P1-201ENST00000506556 DBN1Q16643 649 aa6.31□□□□□ -1.4
THUMPD3P1-201ENST00000506556 CMTR1Q8N1G2 835 aaKnown RBP6.31□□□□□ -1.4
THUMPD3P1-201ENST00000506556 TRERF1Q96PN7 1200 aa6.31□□□□□ -1.4
THUMPD3P1-201ENST00000506556 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
THUMPD3P1-201ENST00000506556 KHNYNO15037 678 aaKnown RBP6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 TREHO43280 583 aa6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 PLCB3Q01970 1234 aa6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 PDE12Q6L8Q7 609 aaKnown RBP6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 FOXD4L4Q8WXT5 416 aaPredicted RBP6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ZNF837Q96EG3 531 aaPredicted RBP6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 BCL2L13Q9BXK5 485 aa6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 EFCC1Q9HA90 598 aa6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
THUMPD3P1-201ENST00000506556 DCDC2BA2VCK2 349 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 UBAP1LF5GYI3 381 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 EFSO43281 561 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 PPFIA3O75145 1194 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 EGFRP00533 1210 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 FMR1Q06787 632 aaKnown RBP eCLIP6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 EAPPQ56P03 285 aaPredicted RBP6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ZNF326Q5BKZ1 582 aaKnown RBP6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 CFHR5Q9BXR6 569 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 MARK1Q9P0L2 795 aa6.29□□□□□ -1.4
THUMPD3P1-201ENST00000506556 RBM47A0AV96 593 aaKnown RBP6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 GPR182O15218 404 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 XYLBO75191 536 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 THBS1P07996 1170 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 MAPTP10636 758 aaKnown RBP6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 TNP2Q05952 138 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 DSC3Q14574 896 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ZNF438Q7Z4V0 828 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NPAS3Q8IXF0 933 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NANOS1Q8WY41 292 aaKnown RBP6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NDFIP2Q9NV92 336 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 CUEDC1Q9NWM3 386 aaPredicted RBP6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 CDC14CA4D256 554 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 LCE2BO14633 110 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 BNIP3LO60238 219 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 IGHA2P01877 340 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ATP2B2Q01814 1243 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NEUROD1Q13562 356 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 GTPBP3Q969Y2 492 aaKnown RBP6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 NIF3L1Q9GZT8 377 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 GGNBP2Q9H3C7 697 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 USP20Q9Y2K6 914 aa6.28□□□□□ -1.4
THUMPD3P1-201ENST00000506556 ITGAEP38570 1179 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 CCINQ13939 588 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 TRIP4Q15650 581 aaPredicted RBP6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 FAM182BQ5T319 152 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 NLRP13Q86W25 1043 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 GIPC2Q8TF65 315 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 ABHD17AQ96GS6 310 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 PNMA5Q96PV4 448 aa6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
THUMPD3P1-201ENST00000506556 P4HBP07237 508 aaKnown RBP6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 FGFR3P22607 806 aa6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 MAPK8P45983 427 aa6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 SFSWAPQ12872 951 aaKnown RBP6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 PMEPA1Q969W9 287 aa6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 ELP3Q9H9T3 547 aa6.26□□□□□ -1.41
THUMPD3P1-201ENST00000506556 A6NHS1 94 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 CPNE3O75131 537 aaKnown RBP6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 TNFRSF21O75509 655 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 GRNP28799 593 aaKnown RBP6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 TTC39BQ5VTQ0 682 aaPredicted RBP6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 FBXO33Q7Z6M2 555 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 VWA5B2Q8N398 1253 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 CSRNP1Q96S65 589 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 GSX2Q9BZM3 304 aa6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 ABI2Q9NYB9 513 aaPredicted RBP6.25□□□□□ -1.41
THUMPD3P1-201ENST00000506556 POTECB2RU33 542 aa6.24□□□□□ -1.41
THUMPD3P1-201ENST00000506556 PHACTR2O75167 634 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms