RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 PASKQ96RG2 1323 aa7.79□□□□□ -1.16
GYPB-205ENST00000505583 ITGBL1O95965 494 aaPredicted RBP7.79□□□□□ -1.16
GYPB-205ENST00000505583 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
GYPB-205ENST00000505583 CCDC93Q567U6 631 aa7.79□□□□□ -1.16
GYPB-205ENST00000505583 TNS4Q8IZW8 715 aa7.79□□□□□ -1.16
GYPB-205ENST00000505583 L3MBTL3Q96JM7 780 aaPredicted RBP7.79□□□□□ -1.16
GYPB-205ENST00000505583 TAF1DQ9H5J8 278 aaPredicted RBP7.79□□□□□ -1.16
GYPB-205ENST00000505583 LAMB2P55268 1798 aa7.79□□□□□ -1.16
GYPB-205ENST00000505583 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 RGL2O15211 777 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 GPTP24298 496 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
GYPB-205ENST00000505583 CRY2Q49AN0 593 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 SOGA3Q5TF21 947 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 C3orf67Q6ZVT6 689 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 RRP7AQ9Y3A4 280 aaKnown RBP7.78□□□□□ -1.16
GYPB-205ENST00000505583 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
GYPB-205ENST00000505583 TAF1P21675 1872 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 FZD9O00144 591 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 MYL6BP14649 208 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 IARSP41252 1262 aaKnown RBP7.77□□□□□ -1.17
GYPB-205ENST00000505583 EAPPQ56P03 285 aaPredicted RBP7.77□□□□□ -1.17
GYPB-205ENST00000505583 SUSD4Q5VX71 490 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 LDHDQ86WU2 507 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
GYPB-205ENST00000505583 ANKRD36CQ5JPF3 1778 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 IQCA1LA6NCM1 817 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
GYPB-205ENST00000505583 ANXA1P04083 346 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 GTF2E1P29083 439 aaPredicted RBP7.76□□□□□ -1.17
GYPB-205ENST00000505583 ALDH1B1P30837 517 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 EPHX2P34913 555 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 FMR1Q06787 632 aaKnown RBP eCLIP7.76□□□□□ -1.17
GYPB-205ENST00000505583 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 PROSER3Q2NL68 480 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 MAP1SQ66K74 1059 aaPredicted RBP7.76□□□□□ -1.17
GYPB-205ENST00000505583 LRP10Q7Z4F1 713 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 ZNF34Q8IZ26 560 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 RTKN2Q8IZC4 609 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 HACL1Q9UJ83 578 aa7.76□□□□□ -1.17
GYPB-205ENST00000505583 FOXN1O15353 648 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 NTSR2O95665 410 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
GYPB-205ENST00000505583 VEGFBP49765 207 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 PDIA6Q15084 440 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 PLCD3Q8N3E9 789 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 CLEC11AQ9Y240 323 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 RIC1Q4ADV7 1423 aa7.75□□□□□ -1.17
GYPB-205ENST00000505583 IBTKQ9P2D0 1353 aaPredicted RBP7.74□□□□□ -1.17
GYPB-205ENST00000505583 COL4A1P02462 1669 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 SCNN1DP51172 638 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 KIF6Q6ZMV9 814 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 MIER1Q8N108 512 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 CNTROBQ8N137 903 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 GPC2Q8N158 579 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 PNISRQ8TF01 805 aaKnown RBP7.74□□□□□ -1.17
GYPB-205ENST00000505583 ZNF428Q96B54 188 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 PSMD1Q99460 953 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
GYPB-205ENST00000505583 DDX60Q8IY21 1712 aaKnown RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 PPEF1O14829 653 aaPredicted RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 EIF2S2P20042 333 aaKnown RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 EPS15P42566 896 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 KRT24Q2M2I5 525 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 CHRDL2Q6WN34 429 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 GIGYF2Q6Y7W6 1299 aaKnown RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 JDP2Q8WYK2 163 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 NECTIN2Q92692 538 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 CRAMP1Q96RY5 1269 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.73□□□□□ -1.17
GYPB-205ENST00000505583 TSPYL4Q9UJ04 414 aa7.73□□□□□ -1.17
GYPB-205ENST00000505583 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 THSD7BQ9C0I4 1608 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 RASSF10A6NK89 507 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 TRAF5O00463 557 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 NEFMP07197 916 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 RIPK4P57078 832 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 AOC3Q16853 763 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 SLC10A5Q5PT55 438 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
GYPB-205ENST00000505583 LARGE2Q8N3Y3 721 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
GYPB-205ENST00000505583 WBP1LQ9NX94 342 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 ABCC4O15439 1325 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 ERBB4Q15303 1308 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
GYPB-205ENST00000505583 DUOX1Q9NRD9 1551 aa7.71□□□□□ -1.17
GYPB-205ENST00000505583 HCLS1P14317 486 aaPredicted RBP7.71□□□□□ -1.18
GYPB-205ENST00000505583 TMPOP42166 694 aaKnown RBP7.71□□□□□ -1.18
GYPB-205ENST00000505583 LBX1P52954 281 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 EIF6P56537 245 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms