RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 GLB1P16278 677 aa5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 EIF4G2P78344 907 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 ZDHHC13Q8IUH4 622 aa5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 BANK1Q8NDB2 785 aa5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 MRPL18Q9H0U6 180 aaKnown RBP5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 ZNF232Q9UNY5 417 aa5.56□□□□□ -1.52
HMGB3P17-201ENST00000504195 EML1O00423 815 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 ALX3O95076 343 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 KCNQ4P56696 695 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 L3MBTL2Q969R5 705 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 SLC4A9Q96Q91 983 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 GPBP1L1Q9HC44 474 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 ANKIB1Q9P2G1 1089 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 NAGPAQ9UK23 515 aa5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
HMGB3P17-201ENST00000504195 DHX15O43143 795 aaKnown RBP5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 NFIAQ12857 509 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 ILDR2Q71H61 639 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 ABI1Q8IZP0 508 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 EFCC1Q9HA90 598 aa5.54□□□□□ -1.52
HMGB3P17-201ENST00000504195 F8W735 103 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 PCSK7Q16549 785 aa5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 MAP7D1Q3KQU3 841 aa5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 TSGA10IPQ3SY00 556 aa5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 CHIC2Q9UKJ5 165 aa5.53□□□□□ -1.52
HMGB3P17-201ENST00000504195 BACH1O14867 736 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 CPB1P15086 417 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 NOS2P35228 1153 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 SPOCD1Q6ZMY3 1216 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 TMEM130Q8N3G9 435 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 DCAF11Q8TEB1 546 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
HMGB3P17-201ENST00000504195 DBX1A6NMT0 343 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 SFI1A8K8P3 1242 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 TMEM229AB2RXF0 380 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 DLL1O00548 723 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 TYRO3Q06418 890 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 TEAD4Q15561 434 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 ELMSAN1Q6PJG2 1045 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 ZDHHC1Q8WTX9 485 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 PRM3Q9NNZ6 103 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 FRRS1LQ9P0K9 344 aa5.51□□□□□ -1.53
HMGB3P17-201ENST00000504195 GPR37L1O60883 481 aa5.5□□□□□ -1.53
HMGB3P17-201ENST00000504195 DEAF1O75398 565 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P17-201ENST00000504195 JUNBP17275 347 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P17-201ENST00000504195 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P17-201ENST00000504195 BRPF1P55201 1214 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P17-201ENST00000504195 PKN1Q16512 942 aa5.49□□□□□ -1.53
HMGB3P17-201ENST00000504195 Q6ZS46 218 aa5.49□□□□□ -1.53
HMGB3P17-201ENST00000504195 LPIN3Q9BQK8 851 aa5.49□□□□□ -1.53
HMGB3P17-201ENST00000504195 SCHIP1Q9P0W5 487 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P17-201ENST00000504195 SERTM1A2A2V5 107 aa5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 GRIK5Q16478 980 aa5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 RNF43Q68DV7 783 aa5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 AGGF1Q8N302 714 aaeCLIP5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 UTP4Q969X6 686 aaKnown RBP5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 CEP41Q9BYV8 373 aa5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 CHMP3Q9Y3E7 222 aa5.48□□□□□ -1.53
HMGB3P17-201ENST00000504195 PRR19A6NJB7 356 aa5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 NFKB1P19838 968 aa5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 ZNF124Q15973 351 aa5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 ZNF648Q5T619 568 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 MTMR14Q8NCE2 650 aa5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 C7orf69Q9H7B7 122 aa5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 SRA1Q9HD15 236 aaKnown RBP5.47□□□□□ -1.53
HMGB3P17-201ENST00000504195 UVSSAQ2YD98 709 aa5.46□□□□□ -1.54
HMGB3P17-201ENST00000504195 PERM1Q5SV97 790 aa5.46□□□□□ -1.54
HMGB3P17-201ENST00000504195 SLC9A9Q8IVB4 645 aa5.46□□□□□ -1.54
HMGB3P17-201ENST00000504195 TRIM42Q8IWZ5 723 aa5.46□□□□□ -1.54
HMGB3P17-201ENST00000504195 TP53INP2Q8IXH6 220 aa5.46□□□□□ -1.54
HMGB3P17-201ENST00000504195 MAP4K3Q8IVH8 894 aa5.45□□□□□ -1.54
HMGB3P17-201ENST00000504195 PLPP7Q8NBV4 271 aa5.45□□□□□ -1.54
HMGB3P17-201ENST00000504195 SHKBP1Q8TBC3 707 aa5.45□□□□□ -1.54
HMGB3P17-201ENST00000504195 FBXL18Q96ME1 805 aa5.45□□□□□ -1.54
HMGB3P17-201ENST00000504195 HMX2A2RU54 273 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 ITGB5P18084 799 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 PSME1Q06323 249 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 CCINQ13939 588 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 TBCELQ5QJ74 424 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 C1orf53Q5VUE5 145 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 CBLL1Q75N03 491 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 C7orf43Q8WVR3 580 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 TTC9Q92623 222 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 SUSD3Q96L08 255 aa5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 UBL7Q96S82 380 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 SMG9Q9H0W8 520 aaKnown RBP5.44□□□□□ -1.54
HMGB3P17-201ENST00000504195 LZTS3O60299 673 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 HIF1AQ16665 826 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 SH3PXD2AQ5TCZ1 1133 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 BTLAQ7Z6A9 289 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 ARMC10Q8N2F6 343 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms