RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
PRDM2-213ENST00000503842 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
PRDM2-213ENST00000503842 ALDH1L1O75891 902 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
PRDM2-213ENST00000503842 RGL2O15211 777 aa16.83■□□□□ 0.28
PRDM2-213ENST00000503842 IGKV5-2P06315 115 aa16.83■□□□□ 0.28
PRDM2-213ENST00000503842 CHRM1P11229 460 aaPredicted RBP16.83■□□□□ 0.28
PRDM2-213ENST00000503842 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
PRDM2-213ENST00000503842 BCORQ6W2J9 1755 aa16.83■□□□□ 0.28
PRDM2-213ENST00000503842 GIGYF2Q6Y7W6 1299 aaKnown RBP16.83■□□□□ 0.28
PRDM2-213ENST00000503842 MYD88Q99836 296 aa16.83■□□□□ 0.28
PRDM2-213ENST00000503842 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
PRDM2-213ENST00000503842 SSFA2P28290 1259 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 HLFQ16534 295 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 SMIM5Q71RC9 77 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 PCDHB13Q9Y5F0 798 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 NUP98P52948 1817 aa16.82■□□□□ 0.28
PRDM2-213ENST00000503842 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 AAMPQ13685 434 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
PRDM2-213ENST00000503842 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRDM2-213ENST00000503842 ARXQ96QS3 562 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
PRDM2-213ENST00000503842 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
PRDM2-213ENST00000503842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
PRDM2-213ENST00000503842 MAP3K13O43283 966 aa16.8■□□□□ 0.28
PRDM2-213ENST00000503842 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
PRDM2-213ENST00000503842 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
PRDM2-213ENST00000503842 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
PRDM2-213ENST00000503842 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
PRDM2-213ENST00000503842 MEIS3Q99687 375 aa16.8■□□□□ 0.28
PRDM2-213ENST00000503842 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
PRDM2-213ENST00000503842 ANKRD36CQ5JPF3 1778 aa16.79■□□□□ 0.28
PRDM2-213ENST00000503842 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
PRDM2-213ENST00000503842 USP44Q9H0E7 712 aa16.79■□□□□ 0.28
PRDM2-213ENST00000503842 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
PRDM2-213ENST00000503842 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
PRDM2-213ENST00000503842 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
PRDM2-213ENST00000503842 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
PRDM2-213ENST00000503842 PHF14O94880 888 aa16.78■□□□□ 0.28
PRDM2-213ENST00000503842 GCKRQ14397 625 aa16.78■□□□□ 0.28
PRDM2-213ENST00000503842 CLEC4GQ6UXB4 293 aa16.78■□□□□ 0.28
PRDM2-213ENST00000503842 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
PRDM2-213ENST00000503842 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
PRDM2-213ENST00000503842 UTYO14607 1347 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 RFC4P35249 363 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
PRDM2-213ENST00000503842 ZPR1O75312 459 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 GNAI3P08754 354 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 ZNF467Q7Z7K2 595 aaPredicted RBP16.76■□□□□ 0.27
PRDM2-213ENST00000503842 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
PRDM2-213ENST00000503842 STK32BQ9NY57 414 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 QSER1Q2KHR3 1735 aa16.76■□□□□ 0.27
PRDM2-213ENST00000503842 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
PRDM2-213ENST00000503842 GRM8O00222 908 aa16.75■□□□□ 0.27
PRDM2-213ENST00000503842 NLRP10Q86W26 655 aa16.75■□□□□ 0.27
PRDM2-213ENST00000503842 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
PRDM2-213ENST00000503842 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
PRDM2-213ENST00000503842 RIOK3O14730 519 aaKnown RBP16.74■□□□□ 0.27
PRDM2-213ENST00000503842 NBPF7P0C2Y1 421 aaPredicted RBP16.74■□□□□ 0.27
PRDM2-213ENST00000503842 GPTP24298 496 aa16.74■□□□□ 0.27
PRDM2-213ENST00000503842 CASP7P55210 303 aa16.74■□□□□ 0.27
PRDM2-213ENST00000503842 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
PRDM2-213ENST00000503842 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
PRDM2-213ENST00000503842 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
PRDM2-213ENST00000503842 H7C1W4 665 aa16.73■□□□□ 0.27
PRDM2-213ENST00000503842 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
PRDM2-213ENST00000503842 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
PRDM2-213ENST00000503842 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
PRDM2-213ENST00000503842 GNAI2P04899 355 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 GYS1P13807 737 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 CLCN6P51797 869 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 PCDHB8Q9UN66 801 aa16.72■□□□□ 0.27
PRDM2-213ENST00000503842 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRDM2-213ENST00000503842 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.27
PRDM2-213ENST00000503842 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
PRDM2-213ENST00000503842 ZBTB38Q8NAP3 1195 aaPredicted RBP16.71■□□□□ 0.27
PRDM2-213ENST00000503842 MS4A3Q96HJ5 214 aa16.71■□□□□ 0.27
PRDM2-213ENST00000503842 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
PRDM2-213ENST00000503842 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms