RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-208ENST00000498594 ZKSCAN8Q15776 578 aaPredicted RBP4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 C9orf131Q5VYM1 1079 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 FAM43BQ6ZT52 329 aaPredicted RBP4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 KLRG1Q96E93 195 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 TESK2Q96S53 571 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 RRAGCQ9HB90 399 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 SLC24A3Q9HC58 644 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 BRMS1Q9HCU9 246 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 CALCOCO1Q9P1Z2 691 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 ARIH1Q9Y4X5 557 aaPredicted RBP4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 EMILIN1Q9Y6C2 1016 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 PCDH11XQ9BZA7 1347 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 PCDH11YQ9BZA8 1340 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 COL11A2P13942 1736 aaPredicted RBP4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 SLX4Q8IY92 1834 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 CASP8AP2Q9UKL3 1982 aa4.6□□□□□ -1.67
CRAMP1-208ENST00000498594 RTL1A6NKG5 1358 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 VGLL3A8MV65 326 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 ZNF500O60304 480 aaPredicted RBP4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 INSRP06213 1382 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 KCNA3P22001 575 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 SSFA2P28290 1259 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 IRX5P78411 483 aaPredicted RBP4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 LMOD3Q0VAK6 560 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 CGNL1Q0VF96 1302 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 SMG6Q86US8 1419 aaKnown RBP4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 ZSCAN30Q86W11 494 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 RASEFQ8IZ41 740 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 TNS4Q8IZW8 715 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 MNS1Q8NEH6 495 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 SMARCC1Q92922 1105 aaPredicted RBP4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 TIGD1Q96MW7 591 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 SLC4A9Q96Q91 983 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 TRPM7Q96QT4 1865 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 MYCBPQ99417 103 aaPredicted RBP4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 FEZ1Q99689 392 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 CREBZFQ9NS37 354 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 ATG3Q9NT62 314 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 NRXN2Q9P2S2 1712 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 CEP83Q9Y592 693 aa4.59□□□□□ -1.67
CRAMP1-208ENST00000498594 C10orf71Q711Q0 1435 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 IBTKQ9P2D0 1353 aaPredicted RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 NRDCO43847 1150 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 GYS1P13807 737 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 CHRNA5P30532 468 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 TMF1P82094 1093 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 HMGN5P82970 282 aaKnown RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 MAP2K1Q02750 393 aaPredicted RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 CCDC173Q0VFZ6 552 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 BECN1Q14457 450 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 SETDB1Q15047 1291 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 TRAPPC3LQ5T215 181 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 NBPF10Q6P3W6 841 aaKnown RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 RPAINQ86UA6 219 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 C16orf71Q8IYS4 520 aaPredicted RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 OTUD6BQ8N6M0 293 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 RBM46Q8TBY0 533 aaKnown RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 MKL1Q969V6 931 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 RBM42Q9BTD8 480 aaKnown RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 FAM13BQ9NYF5 915 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 TMOD3Q9NYL9 352 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 RNF181Q9P0P0 153 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 SRP68Q9UHB9 627 aaKnown RBP4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 ARFGEF2Q9Y6D5 1785 aa4.58□□□□□ -1.68
CRAMP1-208ENST00000498594 NSD3Q9BZ95 1437 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 FLT4P35916 1363 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 FRAT2O75474 233 aaPredicted RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 PRR29P0C7W0 189 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 CCDC172P0C7W6 258 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 PYGBP11216 843 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 PHKG2P15735 406 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 RFC4P35249 363 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 RBM25P49756 843 aaKnown RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 PRELPP51888 382 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 TGFB2P61812 414 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 RASSF7Q02833 373 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 OS9Q13438 667 aaPredicted RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 SASS6Q6UVJ0 657 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 NBPF5PQ86XG9 351 aaPredicted RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 JMYQ8N9B5 988 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 BANK1Q8NDB2 785 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 PPP1R9BQ96SB3 815 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 EYA1Q99502 592 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 NCAPGQ9BPX3 1015 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 CARD14Q9BXL6 1004 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 CCDC87Q9NVE4 849 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 SPG7Q9UQ90 795 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 RTCBQ9Y3I0 505 aaKnown RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 SH3BP1Q9Y3L3 701 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 SCN4AP35499 1836 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 SIPA1L3O60292 1781 aaPredicted RBP4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 UBR2Q8IWV8 1755 aa4.57□□□□□ -1.68
CRAMP1-208ENST00000498594 NCAPD2Q15021 1401 aa4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 PDE4DIPQ5VU43 2346 aa4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 KDRP35968 1356 aa4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 SEMA3EO15041 775 aa4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 PTCD1O75127 700 aaKnown RBP4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 HSPA1AP0DMV8 641 aaKnown RBP4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 HSPA1BP0DMV9 641 aaKnown RBP4.56□□□□□ -1.68
CRAMP1-208ENST00000498594 NEFHP12036 1026 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms