RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
USP11-212ENST00000497179 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
USP11-212ENST00000497179 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
USP11-212ENST00000497179 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
USP11-212ENST00000497179 KIAA1551Q9HCM1 1747 aa18.35■□□□□ 0.53
USP11-212ENST00000497179 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
USP11-212ENST00000497179 ST5P78524 1137 aa18.35■□□□□ 0.53
USP11-212ENST00000497179 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
USP11-212ENST00000497179 ABCC4O15439 1325 aa18.34■□□□□ 0.53
USP11-212ENST00000497179 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
USP11-212ENST00000497179 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
USP11-212ENST00000497179 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
USP11-212ENST00000497179 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
USP11-212ENST00000497179 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
USP11-212ENST00000497179 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
USP11-212ENST00000497179 LAMB2P55268 1798 aa18.34■□□□□ 0.53
USP11-212ENST00000497179 TNRC6CQ9HCJ0 1690 aaKnown RBP18.34■□□□□ 0.53
USP11-212ENST00000497179 NPHP1O15259 732 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 TRIM27P14373 513 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 ERFEQ4G0M1 354 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.52
USP11-212ENST00000497179 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
USP11-212ENST00000497179 GTF2E1P29083 439 aaPredicted RBP18.32■□□□□ 0.52
USP11-212ENST00000497179 GCKRQ14397 625 aa18.32■□□□□ 0.52
USP11-212ENST00000497179 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
USP11-212ENST00000497179 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
USP11-212ENST00000497179 BRIP1Q9BX63 1249 aa18.32■□□□□ 0.52
USP11-212ENST00000497179 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
USP11-212ENST00000497179 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
USP11-212ENST00000497179 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
USP11-212ENST00000497179 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
USP11-212ENST00000497179 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
USP11-212ENST00000497179 COL11A2P13942 1736 aaPredicted RBP18.31■□□□□ 0.52
USP11-212ENST00000497179 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
USP11-212ENST00000497179 FAM89AQ96GI7 184 aa18.3■□□□□ 0.52
USP11-212ENST00000497179 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
USP11-212ENST00000497179 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
USP11-212ENST00000497179 CDHR2Q9BYE9 1310 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 PDE6BP35913 854 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 TGFB2P61812 414 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 PDZRN3Q9UPQ7 1066 aa18.29■□□□□ 0.52
USP11-212ENST00000497179 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
USP11-212ENST00000497179 H7C1W4 665 aa18.28■□□□□ 0.52
USP11-212ENST00000497179 CASP7P55210 303 aa18.28■□□□□ 0.52
USP11-212ENST00000497179 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
USP11-212ENST00000497179 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
USP11-212ENST00000497179 IRS4O14654 1257 aaPredicted RBP18.27■□□□□ 0.52
USP11-212ENST00000497179 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
USP11-212ENST00000497179 GRM8O00222 908 aa18.26■□□□□ 0.51
USP11-212ENST00000497179 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
USP11-212ENST00000497179 C2CD5Q86YS7 1000 aa18.26■□□□□ 0.51
USP11-212ENST00000497179 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
USP11-212ENST00000497179 UTYO14607 1347 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 MS4A1P11836 297 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 DPEP1P16444 411 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 CHRNA5P30532 468 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 CRY2Q49AN0 593 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 C3orf67Q6ZVT6 689 aa18.25■□□□□ 0.51
USP11-212ENST00000497179 JARID2Q92833 1246 aaPredicted RBP18.25■□□□□ 0.51
USP11-212ENST00000497179 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
USP11-212ENST00000497179 BRCA1P38398 1863 aaKnown RBP18.24■□□□□ 0.51
USP11-212ENST00000497179 H0YIN7 160 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 PLIN1O60240 522 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 SRGNP10124 158 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 RLBP1P12271 317 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 KCNA3P22001 575 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
USP11-212ENST00000497179 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
USP11-212ENST00000497179 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
USP11-212ENST00000497179 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
USP11-212ENST00000497179 PDE8AO60658 829 aa18.22■□□□□ 0.51
USP11-212ENST00000497179 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
USP11-212ENST00000497179 NPR1P16066 1061 aa18.22■□□□□ 0.51
USP11-212ENST00000497179 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
USP11-212ENST00000497179 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
USP11-212ENST00000497179 STYK1Q6J9G0 422 aa18.22■□□□□ 0.51
USP11-212ENST00000497179 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
USP11-212ENST00000497179 HOXA10P31260 410 aaPredicted RBP18.21■□□□□ 0.51
USP11-212ENST00000497179 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
USP11-212ENST00000497179 MASTLQ96GX5 879 aa18.21■□□□□ 0.51
USP11-212ENST00000497179 MYH3P11055 1940 aa18.21■□□□□ 0.51
USP11-212ENST00000497179 CTSWP56202 376 aa18.2■□□□□ 0.5
USP11-212ENST00000497179 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
USP11-212ENST00000497179 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
USP11-212ENST00000497179 ITPRIPQ8IWB1 547 aa18.19■□□□□ 0.5
USP11-212ENST00000497179 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
USP11-212ENST00000497179 MEIS3Q99687 375 aa18.19■□□□□ 0.5
USP11-212ENST00000497179 PIM2Q9P1W9 311 aa18.19■□□□□ 0.5
USP11-212ENST00000497179 GNAI3P08754 354 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 FOXO4P98177 505 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms