RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
PRPF4B-209ENST00000494674 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
PRPF4B-209ENST00000494674 RILPL2Q969X0 211 aa13□□□□□ -0.33
PRPF4B-209ENST00000494674 IL25Q9H293 177 aa13□□□□□ -0.33
PRPF4B-209ENST00000494674 JCADQ9P266 1359 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 STARD3NLO95772 234 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 AACSQ86V21 672 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 SIL1Q9H173 461 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 TLR7Q9NYK1 1049 aaKnown RBP12.99□□□□□ -0.33
PRPF4B-209ENST00000494674 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 DDIT3P35638 169 aa12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
PRPF4B-209ENST00000494674 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
PRPF4B-209ENST00000494674 RABEP1Q15276 862 aa12.97□□□□□ -0.33
PRPF4B-209ENST00000494674 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
PRPF4B-209ENST00000494674 IL17RAQ96F46 866 aa12.96□□□□□ -0.33
PRPF4B-209ENST00000494674 BCORQ6W2J9 1755 aa12.96□□□□□ -0.33
PRPF4B-209ENST00000494674 VPS72Q15906 364 aa12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 HLFQ16534 295 aa12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 CNTROBQ8N137 903 aa12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 GPATCH3Q96I76 525 aa12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.34
PRPF4B-209ENST00000494674 SGSM2O43147 1006 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 TFCP2Q12800 502 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 SPRYD3Q8NCJ5 442 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
PRPF4B-209ENST00000494674 K7ELQ4 463 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 EPB41L2O43491 1005 aaKnown RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 BTAF1O14981 1849 aa12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 LAMB2P55268 1798 aa12.94□□□□□ -0.34
PRPF4B-209ENST00000494674 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 ANO2Q9NQ90 1003 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 RAD50Q92878 1312 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 ZNF609O15014 1411 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 EIF5P55010 431 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 ITPK1Q13572 414 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 NLRP10Q86W26 655 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 EVI5LQ96CN4 794 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 LSG1Q9H089 658 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 LRP5O75197 1615 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
PRPF4B-209ENST00000494674 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 SIK1P57059 783 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 ANAPC15P60006 121 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 NGLY1Q96IV0 654 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
PRPF4B-209ENST00000494674 KCNQ2O43526 872 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CSF1RP07333 972 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CHMP5Q9NZZ3 219 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 EYA2O00167 538 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CIAO1O76071 339 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 ATP5JP18859 108 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 GPTP24298 496 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 HSPA4P34932 840 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 DBNDD2Q9BQY9 259 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms