RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SYT1P21579 422 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 GTF3C6Q969F1 213 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 PRAM1Q96QH2 718 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 EIF3CQ99613 913 aaKnown RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 ADAM21Q9UKJ8 722 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 EXOC6BQ9Y2D4 811 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 CCDC151A5D8V7 595 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 CTAGE5O15320 804 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 EIF5P55010 431 aaKnown RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 RGL3Q3MIN7 710 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 CEP85Q6P2H3 762 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 JMYQ8N9B5 988 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 SPC24Q8NBT2 197 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 ZSCAN31Q96LW9 406 aaPredicted RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 TM6SF1Q9BZW5 370 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 NRBP1Q9UHY1 535 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 CAMSAP1Q5T5Y3 1602 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 FAM208AQ9UK61 1670 aaKnown RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 TMCO5BA8MYB1 307 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 GYS2P54840 703 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 ERCC6LQ2NKX8 1250 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 E4F1Q66K89 784 aaPredicted RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 RABGGTAQ92696 567 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 PPP1R13BQ96KQ4 1090 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 SH2B1Q9NRF2 756 aaPredicted RBP5.63□□□□□ -1.51
PRKD3-210ENST00000494667 RAB21Q9UL25 225 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 ARHGAP5Q13017 1502 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 KLHL33A6NCF5 533 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 FCHSD2O94868 740 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SKILP12757 684 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ERCC3P19447 782 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 CALRP27797 417 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SNW1Q13573 536 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ARHGAP29Q52LW3 1261 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 RTF1Q92541 710 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TMX1Q9H3N1 280 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SUFUQ9UMX1 484 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ADCY9O60503 1353 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 UGGT1Q9NYU2 1555 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TUBBP07437 444 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 CASTP20810 708 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 PDE1AP54750 535 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ERC1Q8IUD2 1116 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 LRRC37A3O60309 1634 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ERCC6L2Q5T890 1561 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 PLEKHD1A6NEE1 506 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 POTEB2H3BUK9 544 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SHOX2O60902 331 aaPredicted RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 CHMLP26374 656 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 USP8P40818 1118 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ZRSR1Q15695 479 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 ANO6Q4KMQ2 910 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 NBPF10Q6P3W6 841 aaKnown RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TRIM65Q6PJ69 517 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TADA2BQ86TJ2 420 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 MPHOSPH8Q99549 860 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 CCDC69A6NI79 296 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 PPFIA4O75335 1185 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 PRR29P0C7W0 189 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TUBB2AQ13885 445 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 LUZP1Q86V48 1076 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 XAGE2Q96GT9 111 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 TUBB2BQ9BVA1 445 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SCAND2PQ9GZW5 306 aaPredicted RBP5.62□□□□□ -1.51
PRKD3-210ENST00000494667 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
PRKD3-210ENST00000494667 SOS1Q07889 1333 aaPredicted RBP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MYO1BO43795 1136 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 RGPD1P0DJD0 1748 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 ADRA2BP18089 450 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MLECQ14165 292 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 LEKR1Q6ZMV7 388 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 HOMEZQ8IX15 550 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MSANTD4Q8NCY6 345 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 TRIM5Q9C035 493 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 DLC1Q96QB1 1528 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 HAP1P54257 671 aaPredicted RBP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 GNAI1P63096 354 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 SRPK2P78362 688 aaKnown RBP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MAP3K9P80192 1104 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 PAGR1Q9BTK6 254 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 VIPAS39Q9H9C1 493 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 GDPD2Q9HCC8 539 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 PARP3Q9Y6F1 533 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 CEMIPQ8WUJ3 1361 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 USP42Q9H9J4 1324 aaKnown RBP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 GOLGA6L9A6NEM1 432 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MAP2K2P36507 400 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 AARSP49588 968 aaKnown RBP eCLIP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 ZKSCAN8Q15776 578 aaPredicted RBP5.61□□□□□ -1.51
PRKD3-210ENST00000494667 NBPF11Q86T75 865 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 MICALL1Q8N3F8 863 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 ANKRD20A12PQ8NF67 263 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 UBXN4Q92575 508 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
PRKD3-210ENST00000494667 ZNF165P49910 485 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 HNRNPMP52272 730 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 KRT85P78386 507 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms