RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 LRRC4BQ9NT99 713 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 RPGRIP1LQ68CZ1 1315 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 PITPNM2Q9BZ72 1349 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 NPC1L1Q9UHC9 1359 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 VIRMAQ69YN4 1812 aaKnown RBP6.65□□□□□ -1.34
PTPRK-213ENST00000490332 AXIN1O15169 862 aa6.65□□□□□ -1.34
PTPRK-213ENST00000490332 CFHP08603 1231 aa6.65□□□□□ -1.34
PTPRK-213ENST00000490332 DNAJB2P25686 324 aa6.65□□□□□ -1.34
PTPRK-213ENST00000490332 HMGB2P26583 209 aaKnown RBP6.65□□□□□ -1.34
PTPRK-213ENST00000490332 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-213ENST00000490332 KMT5BQ4FZB7 885 aa6.65□□□□□ -1.34
PTPRK-213ENST00000490332 SIRT1Q96EB6 747 aa6.65□□□□□ -1.34
PTPRK-213ENST00000490332 PLEKHH1Q9ULM0 1364 aa6.65□□□□□ -1.35
PTPRK-213ENST00000490332 SLC10A3P09131 477 aa6.64□□□□□ -1.35
PTPRK-213ENST00000490332 MAP2K1Q02750 393 aaPredicted RBP6.64□□□□□ -1.35
PTPRK-213ENST00000490332 C9orf131Q5VYM1 1079 aa6.64□□□□□ -1.35
PTPRK-213ENST00000490332 PUS7Q96PZ0 661 aaKnown RBP6.64□□□□□ -1.35
PTPRK-213ENST00000490332 STK26Q9P289 416 aa6.64□□□□□ -1.35
PTPRK-213ENST00000490332 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
PTPRK-213ENST00000490332 ZC3H4Q9UPT8 1303 aaKnown RBP6.64□□□□□ -1.35
PTPRK-213ENST00000490332 USP6P35125 1406 aa6.64□□□□□ -1.35
PTPRK-213ENST00000490332 EXOC5O00471 708 aa6.63□□□□□ -1.35
PTPRK-213ENST00000490332 VEGFAP15692 232 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-213ENST00000490332 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
PTPRK-213ENST00000490332 FLAD1Q8NFF5 587 aa6.63□□□□□ -1.35
PTPRK-213ENST00000490332 PPLO60437 1756 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 NR1I2O75469 434 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 RPIAP49247 311 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 IRX6P78412 446 aaPredicted RBP6.62□□□□□ -1.35
PTPRK-213ENST00000490332 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
PTPRK-213ENST00000490332 WDR43Q15061 677 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPRK-213ENST00000490332 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 ARHGAP27Q6ZUM4 889 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 TOM1L2Q6ZVM7 507 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 SCUBE3Q8IX30 993 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 NGDNQ8NEJ9 315 aaKnown RBP6.62□□□□□ -1.35
PTPRK-213ENST00000490332 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 ANP32EQ9BTT0 268 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 RCAN3Q9UKA8 241 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 A0A0C4DFX4 3053 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 COL18A1P39060 1754 aa6.62□□□□□ -1.35
PTPRK-213ENST00000490332 SBNO2Q9Y2G9 1366 aa6.61□□□□□ -1.35
PTPRK-213ENST00000490332 HABP4Q5JVS0 413 aaKnown RBP6.61□□□□□ -1.35
PTPRK-213ENST00000490332 CC2D1BQ5T0F9 858 aaKnown RBP6.61□□□□□ -1.35
PTPRK-213ENST00000490332 COL23A1Q86Y22 540 aaPredicted RBP6.61□□□□□ -1.35
PTPRK-213ENST00000490332 ADGRG1Q9Y653 693 aa6.61□□□□□ -1.35
PTPRK-213ENST00000490332 YTHDC2Q9H6S0 1430 aaKnown RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 ARFGEF1Q9Y6D6 1849 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 RCCD1A6NED2 376 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 TERTO14746 1132 aaKnown RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 PPP2R1AP30153 589 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 VEGFBP49765 207 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 RRP1P56182 461 aaKnown RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 AMER1Q5JTC6 1135 aaPredicted RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 CYP4X1Q8N118 509 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 BEGAINQ9BUH8 593 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 MCOLN1Q9GZU1 580 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 C14orf93Q9H972 538 aaKnown RBP6.6□□□□□ -1.35
PTPRK-213ENST00000490332 BCS1LQ9Y276 419 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 ABCC6O95255 1503 aa6.6□□□□□ -1.35
PTPRK-213ENST00000490332 PIK3C2GO75747 1445 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 WDR17Q8IZU2 1322 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 TGFB2P61812 414 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 CFAP70Q5T0N1 1121 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 B4GALNT3Q6L9W6 998 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 SPSB2Q99619 263 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 RNF181Q9P0P0 153 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 KIF13BQ9NQT8 1826 aa6.59□□□□□ -1.35
PTPRK-213ENST00000490332 LY75O60449 1722 aa6.59□□□□□ -1.36
PTPRK-213ENST00000490332 ITSN1Q15811 1721 aa6.59□□□□□ -1.36
PTPRK-213ENST00000490332 TCERG1O14776 1098 aaKnown RBP6.58□□□□□ -1.36
PTPRK-213ENST00000490332 PTGDRQ13258 359 aa6.58□□□□□ -1.36
PTPRK-213ENST00000490332 PUS10Q3MIT2 529 aaKnown RBP6.58□□□□□ -1.36
PTPRK-213ENST00000490332 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
PTPRK-213ENST00000490332 ADGRF5Q8IZF2 1346 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 CENPJQ9HC77 1338 aaPredicted RBP6.57□□□□□ -1.36
PTPRK-213ENST00000490332 MS4A1P11836 297 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 ERICH6Q7L0X2 663 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 CARD10Q9BWT7 1032 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 ATP13A2Q9NQ11 1180 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 ADAMTS8Q9UP79 889 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 FCF1Q9Y324 198 aaKnown RBP6.57□□□□□ -1.36
PTPRK-213ENST00000490332 SBF1O95248 1867 aa6.57□□□□□ -1.36
PTPRK-213ENST00000490332 BRCA1P38398 1863 aaKnown RBP6.56□□□□□ -1.36
PTPRK-213ENST00000490332 USP54Q70EL1 1684 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 ADAMTS7Q9UKP4 1686 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 GLTPD2A6NH11 291 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 FCHSD2O94868 740 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 CD2BP2O95400 341 aaKnown RBP6.56□□□□□ -1.36
PTPRK-213ENST00000490332 GCP02774 474 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
PTPRK-213ENST00000490332 NUTM2GQ5VZR2 741 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 NSD3Q9BZ95 1437 aa6.56□□□□□ -1.36
PTPRK-213ENST00000490332 N4BP2Q86UW6 1770 aaPredicted RBP6.56□□□□□ -1.36
PTPRK-213ENST00000490332 KIAA1551Q9HCM1 1747 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms