RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
SRSF4-204ENST00000489898 THSD7BQ9C0I4 1608 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 GLTPD2A6NH11 291 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
SRSF4-204ENST00000489898 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 SYNE4Q8N205 404 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
SRSF4-204ENST00000489898 ZNF541Q9H0D2 1346 aa15.49■□□□□ 0.07
SRSF4-204ENST00000489898 TPTE2Q6XPS3 522 aa15.49■□□□□ 0.07
SRSF4-204ENST00000489898 COPS6Q7L5N1 327 aa15.49■□□□□ 0.07
SRSF4-204ENST00000489898 NLRP10Q86W26 655 aa15.49■□□□□ 0.07
SRSF4-204ENST00000489898 RBM46Q8TBY0 533 aaKnown RBP15.49■□□□□ 0.07
SRSF4-204ENST00000489898 TRPM7Q96QT4 1865 aa15.48■□□□□ 0.07
SRSF4-204ENST00000489898 IFT57Q9NWB7 429 aa15.48■□□□□ 0.07
SRSF4-204ENST00000489898 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 SLC10A5Q5PT55 438 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 DNAJC5GQ8N7S2 189 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 RRAGCQ9HB90 399 aa15.47■□□□□ 0.07
SRSF4-204ENST00000489898 ABCC4O15439 1325 aa15.46■□□□□ 0.07
SRSF4-204ENST00000489898 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
SRSF4-204ENST00000489898 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
SRSF4-204ENST00000489898 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
SRSF4-204ENST00000489898 NPM2Q86SE8 214 aaKnown RBP15.46■□□□□ 0.07
SRSF4-204ENST00000489898 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
SRSF4-204ENST00000489898 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
SRSF4-204ENST00000489898 POTEJP0CG39 1038 aa15.45■□□□□ 0.06
SRSF4-204ENST00000489898 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
SRSF4-204ENST00000489898 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
SRSF4-204ENST00000489898 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
SRSF4-204ENST00000489898 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
SRSF4-204ENST00000489898 CCDC27Q2M243 656 aa15.44■□□□□ 0.06
SRSF4-204ENST00000489898 PSMD1Q99460 953 aa15.44■□□□□ 0.06
SRSF4-204ENST00000489898 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
SRSF4-204ENST00000489898 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
SRSF4-204ENST00000489898 HTRA3P83110 453 aa15.43■□□□□ 0.06
SRSF4-204ENST00000489898 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
SRSF4-204ENST00000489898 CRAMP1Q96RY5 1269 aa15.43■□□□□ 0.06
SRSF4-204ENST00000489898 PHAXQ9H814 394 aaKnown RBP15.43■□□□□ 0.06
SRSF4-204ENST00000489898 LAS1LQ9Y4W2 734 aaKnown RBP15.43■□□□□ 0.06
SRSF4-204ENST00000489898 FZD9O00144 591 aa15.42■□□□□ 0.06
SRSF4-204ENST00000489898 DDNO94850 711 aaPredicted RBP15.42■□□□□ 0.06
SRSF4-204ENST00000489898 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
SRSF4-204ENST00000489898 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
SRSF4-204ENST00000489898 PLBD2Q8NHP8 589 aa15.42■□□□□ 0.06
SRSF4-204ENST00000489898 TSR2Q969E8 191 aaKnown RBP15.42■□□□□ 0.06
SRSF4-204ENST00000489898 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
SRSF4-204ENST00000489898 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
SRSF4-204ENST00000489898 NPHP1O15259 732 aa15.41■□□□□ 0.06
SRSF4-204ENST00000489898 FSTL1Q12841 308 aa15.41■□□□□ 0.06
SRSF4-204ENST00000489898 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
SRSF4-204ENST00000489898 UTP14AQ9BVJ6 771 aaKnown RBP15.41■□□□□ 0.06
SRSF4-204ENST00000489898 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
SRSF4-204ENST00000489898 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
SRSF4-204ENST00000489898 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
SRSF4-204ENST00000489898 GNAI1P63096 354 aa15.4■□□□□ 0.06
SRSF4-204ENST00000489898 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
SRSF4-204ENST00000489898 PPP1R42Q7Z4L9 355 aa15.4■□□□□ 0.06
SRSF4-204ENST00000489898 PPEF1O14829 653 aaPredicted RBP15.39■□□□□ 0.05
SRSF4-204ENST00000489898 VEGFAP15692 232 aaPredicted RBP15.39■□□□□ 0.05
SRSF4-204ENST00000489898 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
SRSF4-204ENST00000489898 HSP90AB3PQ58FF7 597 aa15.39■□□□□ 0.05
SRSF4-204ENST00000489898 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
SRSF4-204ENST00000489898 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
SRSF4-204ENST00000489898 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
SRSF4-204ENST00000489898 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
SRSF4-204ENST00000489898 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
SRSF4-204ENST00000489898 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 APLP1P51693 650 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 ANKRD13DQ6ZTN6 518 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 HYPKQ9NX55 129 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 POLR2AP24928 1970 aaKnown RBP15.38■□□□□ 0.05
SRSF4-204ENST00000489898 IL16Q14005 1332 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 PASKQ96RG2 1323 aa15.38■□□□□ 0.05
SRSF4-204ENST00000489898 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
SRSF4-204ENST00000489898 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
SRSF4-204ENST00000489898 RPGRQ92834 1020 aaKnown RBP15.37■□□□□ 0.05
SRSF4-204ENST00000489898 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 SCNN1DP51172 638 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
SRSF4-204ENST00000489898 G2E3Q7L622 706 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
SRSF4-204ENST00000489898 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
SRSF4-204ENST00000489898 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
SRSF4-204ENST00000489898 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
SRSF4-204ENST00000489898 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
SRSF4-204ENST00000489898 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
SRSF4-204ENST00000489898 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
SRSF4-204ENST00000489898 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
SRSF4-204ENST00000489898 ECM29Q5VYK3 1845 aa15.34■□□□□ 0.05
SRSF4-204ENST00000489898 GRAPQ13588 217 aa15.34■□□□□ 0.05
SRSF4-204ENST00000489898 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms