RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
HLA-F-229ENST00000489502 ERFEQ4G0M1 354 aa18.39■□□□□ 0.53
HLA-F-229ENST00000489502 NYXQ9GZU5 481 aa18.39■□□□□ 0.53
HLA-F-229ENST00000489502 DDX60Q8IY21 1712 aaKnown RBP18.39■□□□□ 0.53
HLA-F-229ENST00000489502 CACNA1SQ13698 1873 aa18.38■□□□□ 0.53
HLA-F-229ENST00000489502 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
HLA-F-229ENST00000489502 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
HLA-F-229ENST00000489502 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
HLA-F-229ENST00000489502 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
HLA-F-229ENST00000489502 UTP14AQ9BVJ6 771 aaKnown RBP18.38■□□□□ 0.53
HLA-F-229ENST00000489502 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
HLA-F-229ENST00000489502 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
HLA-F-229ENST00000489502 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
HLA-F-229ENST00000489502 SYNE4Q8N205 404 aa18.37■□□□□ 0.53
HLA-F-229ENST00000489502 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
HLA-F-229ENST00000489502 TGFB2P61812 414 aa18.36■□□□□ 0.53
HLA-F-229ENST00000489502 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
HLA-F-229ENST00000489502 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
HLA-F-229ENST00000489502 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
HLA-F-229ENST00000489502 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
HLA-F-229ENST00000489502 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
HLA-F-229ENST00000489502 CWC25Q9NXE8 425 aaPredicted RBP18.35■□□□□ 0.53
HLA-F-229ENST00000489502 PTPRCP08575 1304 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 BCAR3O75815 825 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 KCNA3P22001 575 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 PDE6BP35913 854 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
HLA-F-229ENST00000489502 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
HLA-F-229ENST00000489502 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
HLA-F-229ENST00000489502 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
HLA-F-229ENST00000489502 HCLS1P14317 486 aaPredicted RBP18.33■□□□□ 0.52
HLA-F-229ENST00000489502 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
HLA-F-229ENST00000489502 CCDC191Q8NCU4 936 aa18.33■□□□□ 0.52
HLA-F-229ENST00000489502 NOB1Q9ULX3 412 aaKnown RBP18.33■□□□□ 0.52
HLA-F-229ENST00000489502 H0YIN7 160 aa18.32■□□□□ 0.52
HLA-F-229ENST00000489502 YBX3P16989 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
HLA-F-229ENST00000489502 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
HLA-F-229ENST00000489502 ARFGEF1Q9Y6D6 1849 aa18.32■□□□□ 0.52
HLA-F-229ENST00000489502 BEND3Q5T5X7 828 aa18.31■□□□□ 0.52
HLA-F-229ENST00000489502 PCCAP05165 728 aaPredicted RBP18.3■□□□□ 0.52
HLA-F-229ENST00000489502 SRGNP10124 158 aa18.3■□□□□ 0.52
HLA-F-229ENST00000489502 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
HLA-F-229ENST00000489502 GPR162Q16538 588 aa18.3■□□□□ 0.52
HLA-F-229ENST00000489502 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
HLA-F-229ENST00000489502 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
HLA-F-229ENST00000489502 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.52
HLA-F-229ENST00000489502 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
HLA-F-229ENST00000489502 BCS1LQ9Y276 419 aa18.3■□□□□ 0.52
HLA-F-229ENST00000489502 MYH3P11055 1940 aa18.29■□□□□ 0.52
HLA-F-229ENST00000489502 SLX4Q8IY92 1834 aa18.29■□□□□ 0.52
HLA-F-229ENST00000489502 KLRG2A4D1S0 409 aaPredicted RBP18.29■□□□□ 0.52
HLA-F-229ENST00000489502 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
HLA-F-229ENST00000489502 GCKRQ14397 625 aa18.29■□□□□ 0.52
HLA-F-229ENST00000489502 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
HLA-F-229ENST00000489502 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
HLA-F-229ENST00000489502 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
HLA-F-229ENST00000489502 SLC10A5Q5PT55 438 aa18.28■□□□□ 0.52
HLA-F-229ENST00000489502 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
HLA-F-229ENST00000489502 COL4A1P02462 1669 aa18.28■□□□□ 0.52
HLA-F-229ENST00000489502 TAF1P21675 1872 aa18.27■□□□□ 0.52
HLA-F-229ENST00000489502 NPR1P16066 1061 aa18.27■□□□□ 0.52
HLA-F-229ENST00000489502 DALRD3Q5D0E6 543 aaKnown RBP18.27■□□□□ 0.52
HLA-F-229ENST00000489502 RPGRQ92834 1020 aaKnown RBP18.27■□□□□ 0.52
HLA-F-229ENST00000489502 MASTLQ96GX5 879 aa18.27■□□□□ 0.52
HLA-F-229ENST00000489502 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
HLA-F-229ENST00000489502 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
HLA-F-229ENST00000489502 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 TRIM27P14373 513 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 STYK1Q6J9G0 422 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 NLRP3Q96P20 1036 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 UTRNP46939 3433 aa18.26■□□□□ 0.51
HLA-F-229ENST00000489502 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
HLA-F-229ENST00000489502 CASP7P55210 303 aa18.25■□□□□ 0.51
HLA-F-229ENST00000489502 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
HLA-F-229ENST00000489502 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
HLA-F-229ENST00000489502 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
HLA-F-229ENST00000489502 ABCC4O15439 1325 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 H7C1W4 665 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 GRM8O00222 908 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 ATF7IPQ6VMQ6 1270 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
HLA-F-229ENST00000489502 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
HLA-F-229ENST00000489502 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
HLA-F-229ENST00000489502 CNKSR1Q969H4 720 aa18.23■□□□□ 0.51
HLA-F-229ENST00000489502 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
HLA-F-229ENST00000489502 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
HLA-F-229ENST00000489502 PDE8AO60658 829 aa18.22■□□□□ 0.51
HLA-F-229ENST00000489502 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
HLA-F-229ENST00000489502 CTSWP56202 376 aa18.22■□□□□ 0.51
HLA-F-229ENST00000489502 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
HLA-F-229ENST00000489502 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
HLA-F-229ENST00000489502 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
HLA-F-229ENST00000489502 CCT4P50991 539 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms