RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 ST5P78524 1137 aa23.81■■□□□ 1.4
MCF2L2-211ENST00000482017 ZKSCAN2Q63HK3 967 aa23.81■■□□□ 1.4
MCF2L2-211ENST00000482017 NYXQ9GZU5 481 aa23.81■■□□□ 1.4
MCF2L2-211ENST00000482017 CWC25Q9NXE8 425 aaPredicted RBP23.81■■□□□ 1.4
MCF2L2-211ENST00000482017 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
MCF2L2-211ENST00000482017 ABCC12Q96J65 1359 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 KIF13BQ9NQT8 1826 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 PLIN1O60240 522 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 ERFEQ4G0M1 354 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 BEND3Q5T5X7 828 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 TPTE2Q6XPS3 522 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 C10orf71Q711Q0 1435 aa23.8■■□□□ 1.4
MCF2L2-211ENST00000482017 TNRC6CQ9HCJ0 1690 aaKnown RBP23.79■■□□□ 1.4
MCF2L2-211ENST00000482017 TRIM27P14373 513 aa23.79■■□□□ 1.4
MCF2L2-211ENST00000482017 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
MCF2L2-211ENST00000482017 SYNE4Q8N205 404 aa23.79■■□□□ 1.4
MCF2L2-211ENST00000482017 LINS1Q8NG48 757 aa23.79■■□□□ 1.4
MCF2L2-211ENST00000482017 CCDC191Q8NCU4 936 aa23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 FAM89AQ96GI7 184 aa23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 FHDC1Q9C0D6 1143 aaPredicted RBP23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 SRCIN1Q9C0H9 1055 aa23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 PXDNLA1KZ92 1463 aa23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 IBTKQ9P2D0 1353 aaPredicted RBP23.78■■□□□ 1.4
MCF2L2-211ENST00000482017 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
MCF2L2-211ENST00000482017 LAMB2P55268 1798 aa23.77■■□□□ 1.4
MCF2L2-211ENST00000482017 TRIM28Q13263 835 aaKnown RBP23.76■■□□□ 1.39
MCF2L2-211ENST00000482017 ARHGAP45Q92619 1136 aa23.76■■□□□ 1.39
MCF2L2-211ENST00000482017 CACNA1SQ13698 1873 aa23.76■■□□□ 1.39
MCF2L2-211ENST00000482017 COL11A2P13942 1736 aaPredicted RBP23.76■■□□□ 1.39
MCF2L2-211ENST00000482017 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
MCF2L2-211ENST00000482017 GCKRQ14397 625 aa23.75■■□□□ 1.39
MCF2L2-211ENST00000482017 FTSJ3Q8IY81 847 aaKnown RBP23.75■■□□□ 1.39
MCF2L2-211ENST00000482017 WWC3Q9ULE0 1092 aa23.75■■□□□ 1.39
MCF2L2-211ENST00000482017 SH3TC1Q8TE82 1336 aa23.75■■□□□ 1.39
MCF2L2-211ENST00000482017 KIAA1551Q9HCM1 1747 aa23.74■■□□□ 1.39
MCF2L2-211ENST00000482017 UBE3BQ7Z3V4 1068 aa23.74■■□□□ 1.39
MCF2L2-211ENST00000482017 NLGN2Q8NFZ4 835 aa23.74■■□□□ 1.39
MCF2L2-211ENST00000482017 ABCC4O15439 1325 aa23.74■■□□□ 1.39
MCF2L2-211ENST00000482017 MYH3P11055 1940 aa23.74■■□□□ 1.39
MCF2L2-211ENST00000482017 ALDH1L1O75891 902 aa23.73■■□□□ 1.39
MCF2L2-211ENST00000482017 PCCAP05165 728 aaPredicted RBP23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 CHRNA5P30532 468 aa23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 DZIP1LQ8IYY4 767 aaKnown RBP23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 ZBTB38Q8NAP3 1195 aaPredicted RBP23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 PANK1Q8TE04 598 aa23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 C9orf78Q9NZ63 289 aaPredicted RBP23.72■■□□□ 1.39
MCF2L2-211ENST00000482017 IRS4O14654 1257 aaPredicted RBP23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 RLBP1P12271 317 aa23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 TMEM57Q8N5G2 664 aa23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 CD2APQ9Y5K6 639 aa23.71■■□□□ 1.39
MCF2L2-211ENST00000482017 RNF123Q5XPI4 1314 aa23.7■■□□□ 1.38
MCF2L2-211ENST00000482017 A0A0G2JLW4 131 aa23.7■■□□□ 1.38
MCF2L2-211ENST00000482017 C3orf67Q6ZVT6 689 aa23.7■■□□□ 1.38
MCF2L2-211ENST00000482017 SYT17Q9BSW7 474 aa23.7■■□□□ 1.38
MCF2L2-211ENST00000482017 BRIP1Q9BX63 1249 aa23.7■■□□□ 1.38
MCF2L2-211ENST00000482017 GRM8O00222 908 aa23.69■■□□□ 1.38
MCF2L2-211ENST00000482017 DPEP1P16444 411 aa23.69■■□□□ 1.38
MCF2L2-211ENST00000482017 PDE6BP35913 854 aa23.69■■□□□ 1.38
MCF2L2-211ENST00000482017 ITPRIPQ8IWB1 547 aa23.69■■□□□ 1.38
MCF2L2-211ENST00000482017 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
MCF2L2-211ENST00000482017 TAF1P21675 1872 aa23.68■■□□□ 1.38
MCF2L2-211ENST00000482017 H7C1W4 665 aa23.68■■□□□ 1.38
MCF2L2-211ENST00000482017 RRP1P56182 461 aaKnown RBP23.68■■□□□ 1.38
MCF2L2-211ENST00000482017 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
MCF2L2-211ENST00000482017 ZNF622Q969S3 477 aaKnown RBP eCLIP23.67■■□□□ 1.38
MCF2L2-211ENST00000482017 CCDC85AQ96PX6 553 aaPredicted RBP23.67■■□□□ 1.38
MCF2L2-211ENST00000482017 CDHR2Q9BYE9 1310 aa23.66■■□□□ 1.38
MCF2L2-211ENST00000482017 H0YIN7 160 aa23.66■■□□□ 1.38
MCF2L2-211ENST00000482017 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
MCF2L2-211ENST00000482017 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
MCF2L2-211ENST00000482017 BRCA1P38398 1863 aaKnown RBP23.66■■□□□ 1.38
MCF2L2-211ENST00000482017 NBPF7P0C2Y1 421 aaPredicted RBP23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 CASP7P55210 303 aa23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 TGFB2P61812 414 aa23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 SLC10A5Q5PT55 438 aa23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 RIC1Q4ADV7 1423 aa23.65■■□□□ 1.38
MCF2L2-211ENST00000482017 PDE8AO60658 829 aa23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 MS4A1P11836 297 aa23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 RPGRQ92834 1020 aaKnown RBP23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 MEIS3Q99687 375 aa23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 USP44Q9H0E7 712 aa23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
MCF2L2-211ENST00000482017 SPEF2Q9C093 1822 aa23.63■■□□□ 1.37
MCF2L2-211ENST00000482017 COG6Q9Y2V7 657 aa23.63■■□□□ 1.37
MCF2L2-211ENST00000482017 CHMP3Q9Y3E7 222 aa23.62■■□□□ 1.37
MCF2L2-211ENST00000482017 UBTFL1P0CB47 393 aaPredicted RBP23.61■■□□□ 1.37
MCF2L2-211ENST00000482017 SRGNP10124 158 aa23.61■■□□□ 1.37
MCF2L2-211ENST00000482017 HSP90B1P14625 803 aaKnown RBP23.61■■□□□ 1.37
MCF2L2-211ENST00000482017 CTSWP56202 376 aa23.61■■□□□ 1.37
MCF2L2-211ENST00000482017 SLX4Q8IY92 1834 aa23.61■■□□□ 1.37
MCF2L2-211ENST00000482017 NPR1P16066 1061 aa23.6■■□□□ 1.37
MCF2L2-211ENST00000482017 EPHA10Q5JZY3 1008 aa23.6■■□□□ 1.37
MCF2L2-211ENST00000482017 MASTLQ96GX5 879 aa23.6■■□□□ 1.37
MCF2L2-211ENST00000482017 ZNF219Q9P2Y4 722 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms