RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 TGFB2P61812 414 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 TPTE2Q6XPS3 522 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
ABCF3-213ENST00000480539 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
ABCF3-213ENST00000480539 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
ABCF3-213ENST00000480539 DNAAF4Q8WXU2 420 aa19.31■□□□□ 0.68
ABCF3-213ENST00000480539 TRMT112Q9UI30 125 aaKnown RBP19.31■□□□□ 0.68
ABCF3-213ENST00000480539 C2CD5Q86YS7 1000 aa19.3■□□□□ 0.68
ABCF3-213ENST00000480539 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
ABCF3-213ENST00000480539 RIC1Q4ADV7 1423 aa19.3■□□□□ 0.68
ABCF3-213ENST00000480539 BRCA1P38398 1863 aaKnown RBP19.3■□□□□ 0.68
ABCF3-213ENST00000480539 IGKV5-2P06315 115 aa19.29■□□□□ 0.68
ABCF3-213ENST00000480539 PDE6BP35913 854 aa19.29■□□□□ 0.68
ABCF3-213ENST00000480539 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
ABCF3-213ENST00000480539 CWF19L2Q2TBE0 894 aaKnown RBP19.29■□□□□ 0.68
ABCF3-213ENST00000480539 LAMB2P55268 1798 aa19.29■□□□□ 0.68
ABCF3-213ENST00000480539 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
ABCF3-213ENST00000480539 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
ABCF3-213ENST00000480539 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-213ENST00000480539 SYNE4Q8N205 404 aa19.28■□□□□ 0.68
ABCF3-213ENST00000480539 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
ABCF3-213ENST00000480539 KCNA3P22001 575 aa19.27■□□□□ 0.68
ABCF3-213ENST00000480539 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
ABCF3-213ENST00000480539 FAM89AQ96GI7 184 aa19.27■□□□□ 0.68
ABCF3-213ENST00000480539 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-213ENST00000480539 PTPRCP08575 1304 aa19.26■□□□□ 0.67
ABCF3-213ENST00000480539 NEURL1BA8MQ27 555 aa19.26■□□□□ 0.67
ABCF3-213ENST00000480539 HCLS1P14317 486 aaPredicted RBP19.26■□□□□ 0.67
ABCF3-213ENST00000480539 YBX3P16989 372 aaKnown RBP eCLIP19.26■□□□□ 0.67
ABCF3-213ENST00000480539 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
ABCF3-213ENST00000480539 C3orf67Q6ZVT6 689 aa19.26■□□□□ 0.67
ABCF3-213ENST00000480539 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
ABCF3-213ENST00000480539 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
ABCF3-213ENST00000480539 CACNA1SQ13698 1873 aa19.25■□□□□ 0.67
ABCF3-213ENST00000480539 H0YIN7 160 aa19.25■□□□□ 0.67
ABCF3-213ENST00000480539 BCAR3O75815 825 aa19.25■□□□□ 0.67
ABCF3-213ENST00000480539 GPR162Q16538 588 aa19.25■□□□□ 0.67
ABCF3-213ENST00000480539 JARID2Q92833 1246 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-213ENST00000480539 NOB1Q9ULX3 412 aaKnown RBP19.25■□□□□ 0.67
ABCF3-213ENST00000480539 BEND3Q5T5X7 828 aa19.24■□□□□ 0.67
ABCF3-213ENST00000480539 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
ABCF3-213ENST00000480539 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCF3-213ENST00000480539 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
ABCF3-213ENST00000480539 PCCAP05165 728 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-213ENST00000480539 SRGNP10124 158 aa19.23■□□□□ 0.67
ABCF3-213ENST00000480539 ZBTB38Q8NAP3 1195 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-213ENST00000480539 PIM2Q9P1W9 311 aa19.23■□□□□ 0.67
ABCF3-213ENST00000480539 KLRG2A4D1S0 409 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-213ENST00000480539 BRPF1P55201 1214 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-213ENST00000480539 FRAT1Q92837 279 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-213ENST00000480539 PDZRN3Q9UPQ7 1066 aa19.22■□□□□ 0.67
ABCF3-213ENST00000480539 GOLGB1Q14789 3259 aaKnown RBP19.21■□□□□ 0.67
ABCF3-213ENST00000480539 IRS4O14654 1257 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-213ENST00000480539 NPR1P16066 1061 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 GCKRQ14397 625 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 DALRD3Q5D0E6 543 aaKnown RBP19.21■□□□□ 0.67
ABCF3-213ENST00000480539 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 MASTLQ96GX5 879 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 SRCIN1Q9C0H9 1055 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 ARFGEF1Q9Y6D6 1849 aa19.21■□□□□ 0.67
ABCF3-213ENST00000480539 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
ABCF3-213ENST00000480539 SLC10A5Q5PT55 438 aa19.2■□□□□ 0.66
ABCF3-213ENST00000480539 STYK1Q6J9G0 422 aa19.2■□□□□ 0.66
ABCF3-213ENST00000480539 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
ABCF3-213ENST00000480539 RPGRQ92834 1020 aaKnown RBP19.2■□□□□ 0.66
ABCF3-213ENST00000480539 NLRP3Q96P20 1036 aa19.2■□□□□ 0.66
ABCF3-213ENST00000480539 API5Q9BZZ5 524 aaKnown RBP19.19■□□□□ 0.66
ABCF3-213ENST00000480539 ZNF219Q9P2Y4 722 aaPredicted RBP19.19■□□□□ 0.66
ABCF3-213ENST00000480539 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
ABCF3-213ENST00000480539 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
ABCF3-213ENST00000480539 PRPF40BQ6NWY9 871 aaKnown RBP19.18■□□□□ 0.66
ABCF3-213ENST00000480539 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
ABCF3-213ENST00000480539 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
ABCF3-213ENST00000480539 TRIM27P14373 513 aa19.17■□□□□ 0.66
ABCF3-213ENST00000480539 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
ABCF3-213ENST00000480539 COL4A1P02462 1669 aa19.17■□□□□ 0.66
ABCF3-213ENST00000480539 H7C1W4 665 aa19.16■□□□□ 0.66
ABCF3-213ENST00000480539 RBM17Q96I25 401 aaKnown RBP19.16■□□□□ 0.66
ABCF3-213ENST00000480539 ABCC4O15439 1325 aa19.16■□□□□ 0.66
ABCF3-213ENST00000480539 GRM8O00222 908 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 PDE8AO60658 829 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 CASP7P55210 303 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 CTSWP56202 376 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 ARHGAP45Q92619 1136 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 CCDC85AQ96PX6 553 aaPredicted RBP19.15■□□□□ 0.66
ABCF3-213ENST00000480539 RCAN3Q9UKA8 241 aa19.15■□□□□ 0.66
ABCF3-213ENST00000480539 UTRNP46939 3433 aa19.14■□□□□ 0.65
ABCF3-213ENST00000480539 MYH3P11055 1940 aa19.14■□□□□ 0.65
ABCF3-213ENST00000480539 IPO8O15397 1037 aaKnown RBP19.14■□□□□ 0.65
ABCF3-213ENST00000480539 C21orf2O43822 256 aa19.14■□□□□ 0.65
ABCF3-213ENST00000480539 HSP90B1P14625 803 aaKnown RBP19.14■□□□□ 0.65
ABCF3-213ENST00000480539 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
ABCF3-213ENST00000480539 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
ABCF3-213ENST00000480539 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
ABCF3-213ENST00000480539 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
ABCF3-213ENST00000480539 GRIN3BO60391 1043 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms