RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
SKI-202ENST00000478223 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
SKI-202ENST00000478223 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
SKI-202ENST00000478223 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
SKI-202ENST00000478223 IL16Q14005 1332 aa15.16■□□□□ 0.02
SKI-202ENST00000478223 FANCIQ9NVI1 1328 aa15.16■□□□□ 0.02
SKI-202ENST00000478223 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
SKI-202ENST00000478223 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
SKI-202ENST00000478223 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
SKI-202ENST00000478223 NLRP10Q86W26 655 aa15.15■□□□□ 0.02
SKI-202ENST00000478223 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
SKI-202ENST00000478223 SNED1Q8TER0 1413 aa15.15■□□□□ 0.02
SKI-202ENST00000478223 NPR1P16066 1061 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 TCIRG1Q13488 830 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 PLBD2Q8NHP8 589 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
SKI-202ENST00000478223 PARP10Q53GL7 1025 aa15.13■□□□□ 0.01
SKI-202ENST00000478223 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
SKI-202ENST00000478223 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
SKI-202ENST00000478223 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
SKI-202ENST00000478223 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
SKI-202ENST00000478223 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 WDR63Q8IWG1 891 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
SKI-202ENST00000478223 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
SKI-202ENST00000478223 COL4A5P29400 1685 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
SKI-202ENST00000478223 G2E3Q7L622 706 aa15.11■□□□□ 0.01
SKI-202ENST00000478223 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
SKI-202ENST00000478223 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
SKI-202ENST00000478223 HCLS1P14317 486 aaPredicted RBP15.1■□□□□ 0.01
SKI-202ENST00000478223 LMNB1P20700 586 aa15.1■□□□□ 0.01
SKI-202ENST00000478223 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
SKI-202ENST00000478223 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
SKI-202ENST00000478223 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
SKI-202ENST00000478223 SCN4AP35499 1836 aa15.09■□□□□ 0.01
SKI-202ENST00000478223 KIF3CO14782 793 aa15.09■□□□□ 0.01
SKI-202ENST00000478223 HOXA10P31260 410 aaPredicted RBP15.09■□□□□ 0.01
SKI-202ENST00000478223 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
SKI-202ENST00000478223 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
SKI-202ENST00000478223 DUOX1Q9NRD9 1551 aa15.08■□□□□ 0
SKI-202ENST00000478223 VAMP4O75379 141 aa15.08■□□□□ 0
SKI-202ENST00000478223 C1QTNF8P60827 252 aa15.08■□□□□ 0
SKI-202ENST00000478223 GOLGA2Q08379 1002 aa15.08■□□□□ 0
SKI-202ENST00000478223 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
SKI-202ENST00000478223 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
SKI-202ENST00000478223 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0
SKI-202ENST00000478223 FAM89AQ96GI7 184 aa15.08■□□□□ 0
SKI-202ENST00000478223 MYD88Q99836 296 aa15.08■□□□□ 0
SKI-202ENST00000478223 TAOK3Q9H2K8 898 aa15.08■□□□□ 0
SKI-202ENST00000478223 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
SKI-202ENST00000478223 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
SKI-202ENST00000478223 LTBP3Q9NS15 1303 aa15.08■□□□□ 0
SKI-202ENST00000478223 ALDH1B1P30837 517 aa15.07■□□□□ 0
SKI-202ENST00000478223 CCDC93Q567U6 631 aa15.07■□□□□ 0
SKI-202ENST00000478223 NLRP3Q96P20 1036 aa15.07■□□□□ 0
SKI-202ENST00000478223 ABCC4O15439 1325 aa15.07■□□□□ 0
SKI-202ENST00000478223 CCER2I3L3R5 266 aa15.06■□□□□ 0
SKI-202ENST00000478223 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
SKI-202ENST00000478223 RBM17Q96I25 401 aaKnown RBP15.06■□□□□ 0
SKI-202ENST00000478223 CRAMP1Q96RY5 1269 aa15.06■□□□□ 0
SKI-202ENST00000478223 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
SKI-202ENST00000478223 SLC4A2P04920 1241 aa15.05■□□□□ -0
SKI-202ENST00000478223 TRIM28Q13263 835 aaKnown RBP15.05■□□□□ -0
SKI-202ENST00000478223 SOGA3Q5TF21 947 aa15.05■□□□□ -0
SKI-202ENST00000478223 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
SKI-202ENST00000478223 STK31Q9BXU1 1019 aa15.05■□□□□ -0
SKI-202ENST00000478223 PSME4Q14997 1843 aa15.05■□□□□ -0
SKI-202ENST00000478223 ZC3H4Q9UPT8 1303 aaKnown RBP15.04■□□□□ -0
SKI-202ENST00000478223 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
SKI-202ENST00000478223 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
SKI-202ENST00000478223 IGKV5-2P06315 115 aa15.04■□□□□ -0
SKI-202ENST00000478223 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -01e-6■■■□□ 16.3
SKI-202ENST00000478223 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
SKI-202ENST00000478223 ZNF277Q9NRM2 450 aaPredicted RBP15.04■□□□□ -0
SKI-202ENST00000478223 KSR2Q6VAB6 950 aa15.03■□□□□ -0
SKI-202ENST00000478223 SCN9AQ15858 1988 aa15.03■□□□□ -0
SKI-202ENST00000478223 ZNF646O15015 1829 aaPredicted RBP15.03■□□□□ -0
SKI-202ENST00000478223 IRS4O14654 1257 aaPredicted RBP15.02■□□□□ -0
SKI-202ENST00000478223 DDX58O95786 925 aaKnown RBP15.02■□□□□ -0
SKI-202ENST00000478223 FLIIQ13045 1269 aa15.02■□□□□ -0
SKI-202ENST00000478223 CWF19L2Q2TBE0 894 aaKnown RBP15.02■□□□□ -0
SKI-202ENST00000478223 MYH16Q9H6N6 1097 aa15.02■□□□□ -0
SKI-202ENST00000478223 RRAGCQ9HB90 399 aa15.02■□□□□ -0
SKI-202ENST00000478223 ADAMTSL1Q8N6G6 1762 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 GLTPD2A6NH11 291 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 MIER1Q8N108 512 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 ZBTB38Q8NAP3 1195 aaPredicted RBP15.01□□□□□ -0.01
SKI-202ENST00000478223 CCDC191Q8NCU4 936 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 CDCA7LQ96GN5 454 aa15.01□□□□□ -0.01
SKI-202ENST00000478223 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
SKI-202ENST00000478223 CEP350Q5VT06 3117 aa15□□□□□ -0.01
SKI-202ENST00000478223 ZNF541Q9H0D2 1346 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms