RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FOXD4L6Q3SYB3 417 aaPredicted RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 FOXD4L3Q6VB84 417 aaPredicted RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 RNF135Q8IUD6 432 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 PGBD3Q8N328 593 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 ZNF777Q9ULD5 760 aaPredicted RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 PCDHB11Q9Y5F2 797 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 DNMT1P26358 1616 aaKnown RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 KIAA1107Q9UPP5 1409 aa7.51□□□□□ -1.21
CKS1B-207ENST00000477676 SPAG9O60271 1321 aaKnown RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 ZNF644Q9H582 1327 aaPredicted RBP7.51□□□□□ -1.21
CKS1B-207ENST00000477676 PLA2R1Q13018 1463 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 FBXO45P0C2W1 286 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 MSX1P28360 303 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 EFHC2Q5JST6 749 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 PCMTD1Q96MG8 357 aaPredicted RBP7.5□□□□□ -1.21
CKS1B-207ENST00000477676 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
CKS1B-207ENST00000477676 ESF1Q9H501 851 aaKnown RBP7.5□□□□□ -1.21
CKS1B-207ENST00000477676 STRCP1A6NGW2 1772 aa7.5□□□□□ -1.21
CKS1B-207ENST00000477676 MBD5Q9P267 1494 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 ALKQ9UM73 1620 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 GNRH1P01148 92 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 ARAFP10398 606 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 TMEM259Q4ZIN3 620 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 FAM117AQ9C073 453 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 HRH3Q9Y5N1 445 aa7.49□□□□□ -1.21
CKS1B-207ENST00000477676 RSPO4Q2I0M5 234 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-207ENST00000477676 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
CKS1B-207ENST00000477676 CHSY3Q70JA7 882 aa7.48□□□□□ -1.21
CKS1B-207ENST00000477676 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-207ENST00000477676 UBAP1LF5GYI3 381 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
CKS1B-207ENST00000477676 GGT6Q6P531 493 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 XAGE2Q96GT9 111 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 FHDC1Q9C0D6 1143 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-207ENST00000477676 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 CFDP1Q9UEE9 299 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-207ENST00000477676 ZNF330Q9Y3S2 320 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-207ENST00000477676 A2ML1A8K2U0 1454 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 PLEKHH2Q8IVE3 1493 aa7.47□□□□□ -1.21
CKS1B-207ENST00000477676 VWDEQ8N2E2 1590 aa7.46□□□□□ -1.21
CKS1B-207ENST00000477676 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
CKS1B-207ENST00000477676 TRIM11Q96F44 468 aa7.46□□□□□ -1.22
CKS1B-207ENST00000477676 KLF15Q9UIH9 416 aa7.46□□□□□ -1.22
CKS1B-207ENST00000477676 MED1Q15648 1581 aaPredicted RBP7.46□□□□□ -1.22
CKS1B-207ENST00000477676 CCNB3Q8WWL7 1395 aa7.46□□□□□ -1.22
CKS1B-207ENST00000477676 APBB1O00213 710 aa7.45□□□□□ -1.22
CKS1B-207ENST00000477676 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-207ENST00000477676 RFC5P40937 340 aa7.45□□□□□ -1.22
CKS1B-207ENST00000477676 MCCD1P59942 119 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-207ENST00000477676 PLVAPQ9BX97 442 aa7.45□□□□□ -1.22
CKS1B-207ENST00000477676 XIRP1Q702N8 1843 aaKnown RBP7.45□□□□□ -1.22
CKS1B-207ENST00000477676 EHBP1L1Q8N3D4 1523 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 ARTNQ5T4W7 220 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
CKS1B-207ENST00000477676 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 ZFP64Q9NPA5 681 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 MTUS2Q5JR59 1369 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 DHX29Q7Z478 1369 aaKnown RBP7.44□□□□□ -1.22
CKS1B-207ENST00000477676 RTEL1-TNFRSF6BF6WH68 1400 aa7.44□□□□□ -1.22
CKS1B-207ENST00000477676 PZPP20742 1482 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 SHANK2Q9UPX8 1470 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 SPATA31C1P0DKV0 1188 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 HSPA1LP34931 641 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 PCDHGC4Q9Y5F7 938 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 ZC3H13Q5T200 1668 aaKnown RBP7.43□□□□□ -1.22
CKS1B-207ENST00000477676 CEP152O94986 1710 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 TNRQ92752 1358 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
CKS1B-207ENST00000477676 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 DEPDC5O75140 1603 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 MROH1Q8NDA8 1641 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 RNF17Q9BXT8 1623 aaKnown RBP7.42□□□□□ -1.22
CKS1B-207ENST00000477676 IQGAP1P46940 1657 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 ADH6P28332 368 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
CKS1B-207ENST00000477676 CAMSAP2Q08AD1 1489 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 NCOA2Q15596 1464 aa7.42□□□□□ -1.22
CKS1B-207ENST00000477676 KIF3BO15066 747 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 FIGNL1Q6PIW4 674 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 GJD4Q96KN9 370 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-207ENST00000477676 CDCA7Q9BWT1 371 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-207ENST00000477676 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
CKS1B-207ENST00000477676 MED14O60244 1454 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 CCDC141Q6ZP82 1450 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 CPS1P31327 1500 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 ARHGEF5Q12774 1597 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 UBR1Q8IWV7 1749 aa7.41□□□□□ -1.22
CKS1B-207ENST00000477676 DYRK3O43781 588 aa7.4□□□□□ -1.22
CKS1B-207ENST00000477676 PIP4K2BP78356 416 aa7.4□□□□□ -1.22
CKS1B-207ENST00000477676 NR1H3Q13133 447 aa7.4□□□□□ -1.22
CKS1B-207ENST00000477676 PPARGC1BQ86YN6 1023 aaKnown RBP7.4□□□□□ -1.22
CKS1B-207ENST00000477676 RHBDD1Q8TEB9 315 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms