RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ADAMTS7Q9UKP4 1686 aa7.54□□□□□ -1.2
SMARCE1-208ENST00000474246 NUP153P49790 1475 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 TBX4P57082 545 aa7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 COL25A1Q9BXS0 654 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 TMEM2Q9UHN6 1383 aa7.53□□□□□ -1.2
SMARCE1-208ENST00000474246 VAMP1P23763 118 aa7.52□□□□□ -1.2
SMARCE1-208ENST00000474246 HDLBPQ00341 1268 aaKnown RBP7.52□□□□□ -1.2
SMARCE1-208ENST00000474246 CALR3Q96L12 384 aaKnown RBP7.52□□□□□ -1.2
SMARCE1-208ENST00000474246 YY1AP1Q9H869 796 aa7.52□□□□□ -1.2
SMARCE1-208ENST00000474246 MEGF6O75095 1541 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 PLSCR1O15162 318 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 EVA1CP58658 441 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 UVSSAQ2YD98 709 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 CCDC184Q52MB2 194 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 MCOLN1Q9GZU1 580 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 VRTNQ9H8Y1 702 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 SYNRGQ9UMZ2 1314 aa7.52□□□□□ -1.21
SMARCE1-208ENST00000474246 OSBPP22059 807 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 PEX19P40855 299 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 CDAN1Q8IWY9 1227 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 CEP63Q96MT8 703 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 CTDP1Q9Y5B0 961 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 UTRNP46939 3433 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 NUTM2FA1L443 756 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 SLC15A2Q16348 729 aa7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 PROCA1Q8NCQ7 364 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 LSM14AQ8ND56 463 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 MYCBPQ99417 103 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 PUF60Q9UHX1 559 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-208ENST00000474246 SYCP2Q9BX26 1530 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 MAN1A1P33908 653 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 PRIM1P49642 420 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 GJC2Q5T442 439 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 SLAIN1Q8ND83 568 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 NAP1L4Q99733 375 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 SPC25Q9HBM1 224 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 TBX22Q9Y458 520 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 PCDHGA4Q9Y5G9 962 aa7.5□□□□□ -1.21
SMARCE1-208ENST00000474246 LAMC1P11047 1609 aa7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 PLEKHG6Q3KR16 790 aa7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 NPAS4Q8IUM7 802 aa7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 GEMIN8Q9NWZ8 242 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 PSMC1P62191 440 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 RBM28Q9NW13 759 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 MKRN1Q9UHC7 482 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-208ENST00000474246 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 TDO2P48775 406 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 RGS3P49796 1198 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 RGL3Q3MIN7 710 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 TTC30BQ8N4P2 665 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 G3BP2Q9UN86 482 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 ATG7O95352 703 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 CD53P19397 219 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 CCDC174Q6PII3 467 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 PPARGC1BQ86YN6 1023 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 DRC7Q8IY82 874 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 ENOX1Q8TC92 643 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 KHSRPQ92945 711 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 IFT122Q9HBG6 1241 aa7.48□□□□□ -1.21
SMARCE1-208ENST00000474246 CHD2O14647 1828 aaKnown RBP7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 CICQ96RK0 1608 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 GPR37O15354 613 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 SOX10P56693 466 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 RASSF7Q02833 373 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 PMFBP1Q8TBY8 1022 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 CDC5LQ99459 802 aaKnown RBP7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 EPAS1Q99814 870 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 SCUBE2Q9NQ36 999 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 RGPD3A6NKT7 1758 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 RGPD4Q7Z3J3 1758 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 KDM2BQ8NHM5 1336 aa7.47□□□□□ -1.21
SMARCE1-208ENST00000474246 ADGRB3O60242 1522 aa7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 SMAPO00193 183 aa7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 CT47B1P0C2W7 299 aaPredicted RBP7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 TANGO6Q9C0B7 1094 aa7.46□□□□□ -1.21
SMARCE1-208ENST00000474246 NWD2Q9ULI1 1742 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 PRC1O43663 620 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 SATB1Q01826 763 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 TCEAL1Q15170 157 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 CDC37Q16543 378 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 IL17RAQ96F46 866 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 CWC25Q9NXE8 425 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms