RNA–Protein interactions for RNA: ENST00000472478.6

BRD8-219, Transcript of bromodomain containing 8, humanhuman

TSL 3

Gene BRD8, Length 745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-219ENST00000472478 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
BRD8-219ENST00000472478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
BRD8-219ENST00000472478 SSFA2P28290 1259 aa13.51□□□□□ -0.25
BRD8-219ENST00000472478 C6orf132Q5T0Z8 1188 aa13.51□□□□□ -0.25
BRD8-219ENST00000472478 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
BRD8-219ENST00000472478 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
BRD8-219ENST00000472478 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
BRD8-219ENST00000472478 GPR162Q16538 588 aa13.5□□□□□ -0.25
BRD8-219ENST00000472478 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
BRD8-219ENST00000472478 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
BRD8-219ENST00000472478 FOSBP53539 338 aa13.49□□□□□ -0.25
BRD8-219ENST00000472478 GLMNQ92990 594 aa13.49□□□□□ -0.25
BRD8-219ENST00000472478 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
BRD8-219ENST00000472478 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
BRD8-219ENST00000472478 KDRP35968 1356 aa13.48□□□□□ -0.25
BRD8-219ENST00000472478 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
BRD8-219ENST00000472478 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
BRD8-219ENST00000472478 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
BRD8-219ENST00000472478 NFATC2IPQ8NCF5 419 aa13.48□□□□□ -0.25
BRD8-219ENST00000472478 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
BRD8-219ENST00000472478 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
BRD8-219ENST00000472478 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
BRD8-219ENST00000472478 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
BRD8-219ENST00000472478 SCUBE2Q9NQ36 999 aa13.47□□□□□ -0.25
BRD8-219ENST00000472478 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
BRD8-219ENST00000472478 CD2APQ9Y5K6 639 aa13.47□□□□□ -0.25
BRD8-219ENST00000472478 GRIN3BO60391 1043 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 HMOX1P09601 288 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 CD46P15529 392 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 ABL2P42684 1182 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.25
BRD8-219ENST00000472478 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
BRD8-219ENST00000472478 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
BRD8-219ENST00000472478 ITGB4P16144 1822 aa13.46□□□□□ -0.26
BRD8-219ENST00000472478 U2SURPO15042 1029 aaKnown RBP13.45□□□□□ -0.26
BRD8-219ENST00000472478 PRSS12P56730 875 aa13.45□□□□□ -0.26
BRD8-219ENST00000472478 ITPK1Q13572 414 aa13.45□□□□□ -0.26
BRD8-219ENST00000472478 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
BRD8-219ENST00000472478 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
BRD8-219ENST00000472478 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
BRD8-219ENST00000472478 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 RFC4P35249 363 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 PBXIP1Q96AQ6 731 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 C5P01031 1676 aa13.44□□□□□ -0.26
BRD8-219ENST00000472478 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
BRD8-219ENST00000472478 KCNA1Q09470 495 aa13.43□□□□□ -0.26
BRD8-219ENST00000472478 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
BRD8-219ENST00000472478 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 LILRB3O75022 631 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
BRD8-219ENST00000472478 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
BRD8-219ENST00000472478 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
BRD8-219ENST00000472478 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
BRD8-219ENST00000472478 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
BRD8-219ENST00000472478 POM121CA8CG34 1229 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 GNAT3A8MTJ3 354 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 BRD1O95696 1058 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 TEFQ10587 303 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
BRD8-219ENST00000472478 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
BRD8-219ENST00000472478 NEFMP07197 916 aa13.39□□□□□ -0.27
BRD8-219ENST00000472478 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
BRD8-219ENST00000472478 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
BRD8-219ENST00000472478 TTC5Q8N0Z6 440 aa13.39□□□□□ -0.27
BRD8-219ENST00000472478 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
BRD8-219ENST00000472478 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
BRD8-219ENST00000472478 RCCD1A6NED2 376 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 AP1G2O75843 785 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
BRD8-219ENST00000472478 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
BRD8-219ENST00000472478 TUBGCP6Q96RT7 1819 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 ZPR1O75312 459 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 MMP10P09238 476 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 USP17L8P0C7I0 530 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
BRD8-219ENST00000472478 TGFB2P61812 414 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRD8-219ENST00000472478 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
BRD8-219ENST00000472478 MOXD2PA6NHM9 499 aa13.36□□□□□ -0.27
BRD8-219ENST00000472478 STARD3NLO95772 234 aa13.36□□□□□ -0.27
BRD8-219ENST00000472478 QPCTQ16769 361 aa13.36□□□□□ -0.27
BRD8-219ENST00000472478 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
BRD8-219ENST00000472478 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
BRD8-219ENST00000472478 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
BRD8-219ENST00000472478 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
BRD8-219ENST00000472478 GYS1P13807 737 aa13.35□□□□□ -0.27
BRD8-219ENST00000472478 PRKAR2BP31323 418 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms