RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
CCNL1-213ENST00000471044 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
CCNL1-213ENST00000471044 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.23
CCNL1-213ENST00000471044 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
CCNL1-213ENST00000471044 SBF1O95248 1867 aa16.46■□□□□ 0.22
CCNL1-213ENST00000471044 CAMTA2O94983 1202 aa16.45■□□□□ 0.22
CCNL1-213ENST00000471044 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
CCNL1-213ENST00000471044 TBC1D9BQ66K14 1250 aa16.45■□□□□ 0.22
CCNL1-213ENST00000471044 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
CCNL1-213ENST00000471044 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
CCNL1-213ENST00000471044 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
CCNL1-213ENST00000471044 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
CCNL1-213ENST00000471044 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
CCNL1-213ENST00000471044 NUP98P52948 1817 aa16.43■□□□□ 0.22
CCNL1-213ENST00000471044 CHRNA5P30532 468 aa16.43■□□□□ 0.22
CCNL1-213ENST00000471044 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
CCNL1-213ENST00000471044 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
CCNL1-213ENST00000471044 RIPK4P57078 832 aa16.43■□□□□ 0.22
CCNL1-213ENST00000471044 EIF4A1P60842 406 aaKnown RBP16.43■□□□□ 0.22
CCNL1-213ENST00000471044 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
CCNL1-213ENST00000471044 DNAJC5GQ8N7S2 189 aa16.43■□□□□ 0.22
CCNL1-213ENST00000471044 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
CCNL1-213ENST00000471044 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
CCNL1-213ENST00000471044 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
CCNL1-213ENST00000471044 NBPF10Q6P3W6 841 aaKnown RBP16.42■□□□□ 0.22
CCNL1-213ENST00000471044 NBPF15Q8N660 670 aa16.42■□□□□ 0.22
CCNL1-213ENST00000471044 PLSCR2Q9NRY7 297 aa16.42■□□□□ 0.22
CCNL1-213ENST00000471044 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
CCNL1-213ENST00000471044 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
CCNL1-213ENST00000471044 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCNL1-213ENST00000471044 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
CCNL1-213ENST00000471044 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
CCNL1-213ENST00000471044 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
CCNL1-213ENST00000471044 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
CCNL1-213ENST00000471044 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-213ENST00000471044 TOMM70O94826 608 aa16.4■□□□□ 0.22
CCNL1-213ENST00000471044 FBXO22Q8NEZ5 403 aa16.4■□□□□ 0.22
CCNL1-213ENST00000471044 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
CCNL1-213ENST00000471044 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
CCNL1-213ENST00000471044 BABAM1Q9NWV8 329 aa16.4■□□□□ 0.22
CCNL1-213ENST00000471044 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
CCNL1-213ENST00000471044 PRR5LQ6MZQ0 368 aa16.39■□□□□ 0.21
CCNL1-213ENST00000471044 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
CCNL1-213ENST00000471044 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
CCNL1-213ENST00000471044 PCNTO95613 3336 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 H0YIN7 160 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 MFRPQ9BY79 579 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
CCNL1-213ENST00000471044 PDE6BP35913 854 aa16.36■□□□□ 0.21
CCNL1-213ENST00000471044 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
CCNL1-213ENST00000471044 CNBD1Q8NA66 436 aa16.36■□□□□ 0.21
CCNL1-213ENST00000471044 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
CCNL1-213ENST00000471044 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
CCNL1-213ENST00000471044 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
CCNL1-213ENST00000471044 ST5P78524 1137 aa16.35■□□□□ 0.21
CCNL1-213ENST00000471044 HTRA3P83110 453 aa16.35■□□□□ 0.21
CCNL1-213ENST00000471044 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
CCNL1-213ENST00000471044 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
CCNL1-213ENST00000471044 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
CCNL1-213ENST00000471044 HLFQ16534 295 aa16.34■□□□□ 0.21
CCNL1-213ENST00000471044 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-213ENST00000471044 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
CCNL1-213ENST00000471044 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCNL1-213ENST00000471044 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.2
CCNL1-213ENST00000471044 NPHP1O15259 732 aa16.33■□□□□ 0.2
CCNL1-213ENST00000471044 C9orf131Q5VYM1 1079 aa16.33■□□□□ 0.2
CCNL1-213ENST00000471044 MARVELD3Q96A59 401 aa16.33■□□□□ 0.2
CCNL1-213ENST00000471044 CHL1O00533 1208 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 MYL6BP14649 208 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 TMEM92Q6UXU6 159 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
CCNL1-213ENST00000471044 CDAN1Q8IWY9 1227 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 RBM46Q8TBY0 533 aaKnown RBP16.32■□□□□ 0.2
CCNL1-213ENST00000471044 KLRG1Q96E93 195 aa16.32■□□□□ 0.2
CCNL1-213ENST00000471044 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
CCNL1-213ENST00000471044 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
CCNL1-213ENST00000471044 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
CCNL1-213ENST00000471044 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.23e-14■□□□□ 10.1
CCNL1-213ENST00000471044 SRGNP10124 158 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 HOXB3P14651 431 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-213ENST00000471044 PDIA6Q15084 440 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
CCNL1-213ENST00000471044 KLRG2A4D1S0 409 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-213ENST00000471044 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-213ENST00000471044 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
CCNL1-213ENST00000471044 RASSF7Q02833 373 aa16.29■□□□□ 0.2
CCNL1-213ENST00000471044 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms