RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 NEFMP07197 916 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 MS4A1P11836 297 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 ATP6V1AP38606 617 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 IRX6P78412 446 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-216ENST00000470998 CALD1Q05682 793 aaKnown RBP7.3□□□□□ -1.24
HDAC8-216ENST00000470998 FUT2Q10981 343 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 PDE3AQ14432 1141 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 LRRC37A3O60309 1634 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 PEAK1Q9H792 1746 aa7.3□□□□□ -1.24
HDAC8-216ENST00000470998 MAPK8IP3Q9UPT6 1336 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 TCERG1O14776 1098 aaKnown RBP7.29□□□□□ -1.24
HDAC8-216ENST00000470998 FYB1O15117 783 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 KCNQ2O43526 872 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 KDM4AO75164 1064 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 HOXC9P31274 260 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 AMPHP49418 695 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 USP46P62068 366 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 PUS10Q3MIT2 529 aaKnown RBP7.29□□□□□ -1.24
HDAC8-216ENST00000470998 TJAP1Q5JTD0 557 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 B4GALNT3Q6L9W6 998 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 ZNF428Q96B54 188 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 SPON1Q9HCB6 807 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 KIF24Q5T7B8 1368 aa7.29□□□□□ -1.24
HDAC8-216ENST00000470998 MAP3K19Q56UN5 1328 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-216ENST00000470998 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 DIAPH1O60610 1272 aaKnown RBP7.28□□□□□ -1.24
HDAC8-216ENST00000470998 ZPR1O75312 459 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 HMGB2P26583 209 aaKnown RBP7.28□□□□□ -1.24
HDAC8-216ENST00000470998 TXNRD1Q16881 649 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 TMUB1Q9BVT8 246 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 REPIN1Q9BWE0 567 aaKnown RBP7.28□□□□□ -1.24
HDAC8-216ENST00000470998 STK32BQ9NY57 414 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 RREB1Q92766 1687 aa7.28□□□□□ -1.24
HDAC8-216ENST00000470998 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-216ENST00000470998 GGCXP38435 758 aa7.27□□□□□ -1.25
HDAC8-216ENST00000470998 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
HDAC8-216ENST00000470998 LMOD3Q0VAK6 560 aa7.27□□□□□ -1.25
HDAC8-216ENST00000470998 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
HDAC8-216ENST00000470998 IFFO2Q5TF58 517 aa7.27□□□□□ -1.25
HDAC8-216ENST00000470998 CENPQQ7L2Z9 268 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-216ENST00000470998 BEGAINQ9BUH8 593 aa7.27□□□□□ -1.25
HDAC8-216ENST00000470998 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
HDAC8-216ENST00000470998 SLC15A2Q16348 729 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 SLC27A3Q5K4L6 730 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 CCDC146Q8IYE0 955 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 ZNF516Q92618 1163 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 GGNBP2Q9H3C7 697 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 PPP1R1BQ9UD71 204 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-216ENST00000470998 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-216ENST00000470998 WNK3Q9BYP7 1800 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 NUP188Q5SRE5 1749 aa7.26□□□□□ -1.25
HDAC8-216ENST00000470998 KIF20BQ96Q89 1820 aa7.25□□□□□ -1.25
HDAC8-216ENST00000470998 NEUROD2Q15784 382 aa7.25□□□□□ -1.25
HDAC8-216ENST00000470998 Q3C1V9 767 aa7.25□□□□□ -1.25
HDAC8-216ENST00000470998 PTF1AQ7RTS3 328 aa7.25□□□□□ -1.25
HDAC8-216ENST00000470998 EXOC6Q8TAG9 804 aa7.25□□□□□ -1.25
HDAC8-216ENST00000470998 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
HDAC8-216ENST00000470998 LTV1Q96GA3 475 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-216ENST00000470998 FLT4P35916 1363 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 TLL1O43897 1013 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
HDAC8-216ENST00000470998 TNNT2P45379 298 aaPredicted RBP7.24□□□□□ -1.25
HDAC8-216ENST00000470998 MORN1Q5T089 497 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 RAPGEF4Q8WZA2 1011 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 ACSBG1Q96GR2 724 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 PLEKHF1Q96S99 279 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 MTFR1LQ9H019 292 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 CHMP4BQ9H444 224 aaKnown RBP7.24□□□□□ -1.25
HDAC8-216ENST00000470998 FAM208AQ9UK61 1670 aaKnown RBP7.24□□□□□ -1.25
HDAC8-216ENST00000470998 KIF16BQ96L93 1317 aa7.24□□□□□ -1.25
HDAC8-216ENST00000470998 SBF2Q86WG5 1849 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 HOXA2O43364 376 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 ADH1BP00325 375 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 CANXP27824 592 aaKnown RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 TMPOP42166 694 aaKnown RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 RRS1Q15050 365 aaKnown RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 NBPF6Q5VWK0 638 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 SCUBE3Q8IX30 993 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 DDX54Q8TDD1 881 aaKnown RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 SLC16A10Q8TF71 515 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 NBPF4Q96M43 638 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 CRBNQ96SW2 442 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
HDAC8-216ENST00000470998 POLKQ9UBT6 870 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 KDM2BQ8NHM5 1336 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 LTN1O94822 1766 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 RGPD5Q99666 1765 aa7.23□□□□□ -1.25
HDAC8-216ENST00000470998 NHSQ6T4R5 1651 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 PLEKHG2Q9H7P9 1386 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 U2SURPO15042 1029 aaKnown RBP7.22□□□□□ -1.25
HDAC8-216ENST00000470998 FBLN1P23142 703 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 RARSP54136 660 aaKnown RBP7.22□□□□□ -1.25
HDAC8-216ENST00000470998 BRPF1P55201 1214 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-216ENST00000470998 ALDH1L2Q3SY69 923 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 SPSB2Q99619 263 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms