RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KIF16BQ96L93 1317 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 BCL2L13Q9BXK5 485 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 NMRK2Q9NPI5 230 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
CDC42SE1-203ENST00000470278 RNF123Q5XPI4 1314 aa19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 SERPINB2P05120 415 aa19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 CHRNA5P30532 468 aa19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 ISCA1Q9BUE6 129 aa19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 METTL22Q9BUU2 404 aaPredicted RBP19.04■□□□□ 0.64
CDC42SE1-203ENST00000470278 RIC1Q4ADV7 1423 aa19.03■□□□□ 0.64
CDC42SE1-203ENST00000470278 LAMB2P55268 1798 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 GPTP24298 496 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 PRELPP51888 382 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 ARHGAP27Q6ZUM4 889 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 NLRP10Q86W26 655 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 DNAAF4Q8WXU2 420 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
CDC42SE1-203ENST00000470278 PCNTO95613 3336 aa19.01■□□□□ 0.63
CDC42SE1-203ENST00000470278 NEXNQ0ZGT2 675 aa19.01■□□□□ 0.63
CDC42SE1-203ENST00000470278 PRR5LQ6MZQ0 368 aa19.01■□□□□ 0.63
CDC42SE1-203ENST00000470278 NBPF5PQ86XG9 351 aaPredicted RBP19.01■□□□□ 0.63
CDC42SE1-203ENST00000470278 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
CDC42SE1-203ENST00000470278 NTSR2O95665 410 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 TPTE2Q6XPS3 522 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 PPP1R42Q7Z4L9 355 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 MYD88Q99836 296 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 CACNA1SQ13698 1873 aa19■□□□□ 0.63
CDC42SE1-203ENST00000470278 DICER1Q9UPY3 1922 aaKnown RBP19■□□□□ 0.63
CDC42SE1-203ENST00000470278 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
CDC42SE1-203ENST00000470278 SUSD4Q5VX71 490 aa18.99■□□□□ 0.63
CDC42SE1-203ENST00000470278 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 BCAR3O75815 825 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 ST5P78524 1137 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 IFFO2Q5TF58 517 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 NOB1Q9ULX3 412 aaKnown RBP18.98■□□□□ 0.63
CDC42SE1-203ENST00000470278 DDX60Q8IY21 1712 aaKnown RBP18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 ABCC12Q96J65 1359 aa18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 F6X3S4 739 aa18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 BEND3Q5T5X7 828 aa18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 UTP14AQ9BVJ6 771 aaKnown RBP18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 CWC25Q9NXE8 425 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
CDC42SE1-203ENST00000470278 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
CDC42SE1-203ENST00000470278 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
CDC42SE1-203ENST00000470278 TOMM70O94826 608 aa18.96■□□□□ 0.63
CDC42SE1-203ENST00000470278 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
CDC42SE1-203ENST00000470278 BRIP1Q9BX63 1249 aa18.96■□□□□ 0.63
CDC42SE1-203ENST00000470278 NPHP1O15259 732 aa18.95■□□□□ 0.62
CDC42SE1-203ENST00000470278 RASSF7Q02833 373 aa18.95■□□□□ 0.62
CDC42SE1-203ENST00000470278 ZBTB38Q8NAP3 1195 aaPredicted RBP18.95■□□□□ 0.62
CDC42SE1-203ENST00000470278 ABCC4O15439 1325 aa18.95■□□□□ 0.62
CDC42SE1-203ENST00000470278 SH3TC1Q8TE82 1336 aa18.95■□□□□ 0.62
CDC42SE1-203ENST00000470278 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
CDC42SE1-203ENST00000470278 ATF7IPQ6VMQ6 1270 aa18.94■□□□□ 0.62
CDC42SE1-203ENST00000470278 NUTM1Q86Y26 1132 aa18.94■□□□□ 0.62
CDC42SE1-203ENST00000470278 TRMT112Q9UI30 125 aaKnown RBP18.94■□□□□ 0.62
CDC42SE1-203ENST00000470278 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
CDC42SE1-203ENST00000470278 SLX4Q8IY92 1834 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 PCCAP05165 728 aaPredicted RBP18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 TRIM27P14373 513 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 GTF2E1P29083 439 aaPredicted RBP18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 PDE6BP35913 854 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 GCKRQ14397 625 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 ERFEQ4G0M1 354 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 SLC10A5Q5PT55 438 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 RNF181Q9P0P0 153 aa18.93■□□□□ 0.62
CDC42SE1-203ENST00000470278 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
CDC42SE1-203ENST00000470278 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
CDC42SE1-203ENST00000470278 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
CDC42SE1-203ENST00000470278 HSP90B1P14625 803 aaKnown RBP18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 HTRA3P83110 453 aa18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 CRY2Q49AN0 593 aa18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 RBM46Q8TBY0 533 aaKnown RBP18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 FRAT1Q92837 279 aaPredicted RBP18.91■□□□□ 0.62
CDC42SE1-203ENST00000470278 MYH3P11055 1940 aa18.9■□□□□ 0.62
CDC42SE1-203ENST00000470278 NFKBIEO00221 500 aa18.9■□□□□ 0.62
CDC42SE1-203ENST00000470278 APLP1P51693 650 aa18.9■□□□□ 0.62
CDC42SE1-203ENST00000470278 FAM89AQ96GI7 184 aa18.9■□□□□ 0.62
CDC42SE1-203ENST00000470278 H7C1W4 665 aa18.89■□□□□ 0.61
CDC42SE1-203ENST00000470278 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
CDC42SE1-203ENST00000470278 UTYO14607 1347 aa18.89■□□□□ 0.61
CDC42SE1-203ENST00000470278 GRM8O00222 908 aa18.88■□□□□ 0.61
CDC42SE1-203ENST00000470278 CASP7P55210 303 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms