RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 CETN1Q12798 172 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 FLIIQ13045 1269 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 CCDC40Q4G0X9 1142 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 TRAPPC3LQ5T215 181 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 CCDC174Q6PII3 467 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 FILIP1Q7Z7B0 1213 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 BTG4Q9NY30 223 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 FAM83GA6ND36 823 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 TCP11L1Q9NUJ3 509 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 SLC4A4Q9Y6R1 1079 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 FANCAO15360 1455 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 FBLN1P23142 703 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 LRRC59Q96AG4 307 aaKnown RBP8.15□□□□□ -1.11
CD46-212ENST00000469535 ZMYND15Q9H091 742 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 ZBTB21Q9ULJ3 1066 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 PI4KAP2A4QPH2 592 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 STXBP4Q6ZWJ1 553 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 PI4KAP1Q8N8J0 262 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 SMARCC2Q8TAQ2 1214 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 SLC26A6Q9BXS9 759 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 SSX2IPQ9Y2D8 614 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 ARAP1Q96P48 1450 aa8.15□□□□□ -1.11
CD46-212ENST00000469535 PHACTR2O75167 634 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 FGFR1OPO95684 399 aaKnown RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 CALM1P0DP23 149 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 CALM2P0DP24 149 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 CALM3P0DP25 149 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 EP400NLQ6ZTU2 488 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 LMAN1P49257 510 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 NCBP1Q09161 790 aaKnown RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 IQCEQ6IPM2 695 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 IQGAP2Q13576 1575 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 GRIN2AQ12879 1464 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 ARHGAP29Q52LW3 1261 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 UQCRFS1P1P0C7P4 283 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 RBM17Q96I25 401 aaKnown RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 PANK2Q9BZ23 570 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 TNNI2P48788 182 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 MTIF2P46199 727 aaKnown RBP8.14□□□□□ -1.11
CD46-212ENST00000469535 HOOK3Q86VS8 718 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 EYA3Q99504 573 aa8.14□□□□□ -1.11
CD46-212ENST00000469535 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 WDR62O43379 1518 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 HMGB1P09429 215 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 CCDC91Q7Z6B0 441 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 CAMSAP2Q08AD1 1489 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 B4DLN1 442 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 MRPL12P52815 198 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 IFIT1BQ5T764 474 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 CHPF2Q9P2E5 772 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 CCNL1Q9UK58 526 aaPredicted RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 METAP2P50579 478 aaKnown RBP eCLIP8.13□□□□□ -1.11
CD46-212ENST00000469535 APBA3O96018 575 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 FAM98CQ17RN3 349 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 CNNM3Q8NE01 707 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 CPLX3Q8WVH0 158 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 IARSP41252 1262 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
CD46-212ENST00000469535 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
CD46-212ENST00000469535 MRE11P49959 708 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 AMPD3Q01432 767 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 COPS6Q7L5N1 327 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 CCDC148Q8NFR7 591 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 AKNAD1Q5T1N1 836 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 NUP88Q99567 741 aaPredicted RBP8.12□□□□□ -1.11
CD46-212ENST00000469535 ABCC5O15440 1437 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
CD46-212ENST00000469535 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 STX6O43752 255 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 ARL1P40616 181 aaPredicted RBP8.12□□□□□ -1.11
CD46-212ENST00000469535 SSH1Q8WYL5 1049 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
CD46-212ENST00000469535 WTAPQ15007 396 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 TSHZ3Q63HK5 1081 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 LEKR1Q6ZMV7 388 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 OTUD6BQ8N6M0 293 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 EVI5LQ96CN4 794 aa8.12□□□□□ -1.11
CD46-212ENST00000469535 NCOA7Q8NI08 942 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 ERMNQ8TAM6 284 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.11□□□□□ -1.113e-6■■□□□ 12.8
CD46-212ENST00000469535 CALRP27797 417 aaKnown RBP8.11□□□□□ -1.11
CD46-212ENST00000469535 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 FERMT1Q9BQL6 677 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms