RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SFSWAPQ12872 951 aaKnown RBP7.41□□□□□ -1.22
SMC4-208ENST00000467468 EFCC1Q9HA90 598 aa7.41□□□□□ -1.22
SMC4-208ENST00000467468 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
SMC4-208ENST00000467468 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
SMC4-208ENST00000467468 TMEM88BA6NKF7 163 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 NEURL1BA8MQ27 555 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.22
SMC4-208ENST00000467468 IDH3AP50213 366 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 PODNQ7Z5L7 613 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 GALNT6Q8NCL4 622 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 IFT43Q96FT9 208 aa7.4□□□□□ -1.22
SMC4-208ENST00000467468 DNMT3AQ9Y6K1 912 aaPredicted RBP7.4□□□□□ -1.22
SMC4-208ENST00000467468 MICAL2O94851 1124 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 AMPD1P23109 780 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 COX20Q5RI15 118 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 SCARF2Q96GP6 870 aaPredicted RBP7.39□□□□□ -1.23
SMC4-208ENST00000467468 PNMA5Q96PV4 448 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 FAM13BQ9NYF5 915 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 BCS1LQ9Y276 419 aa7.39□□□□□ -1.23
SMC4-208ENST00000467468 SIN3BO75182 1162 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 EPXP11678 715 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
SMC4-208ENST00000467468 SYT9Q86SS6 491 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 ABTB2Q8N961 1025 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 DMGDHQ9UI17 866 aaKnown RBP7.38□□□□□ -1.23
SMC4-208ENST00000467468 HCN2Q9UL51 889 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
SMC4-208ENST00000467468 ALAS2P22557 587 aa7.37□□□□□ -1.23
SMC4-208ENST00000467468 INPP5BP32019 993 aa7.37□□□□□ -1.23
SMC4-208ENST00000467468 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
SMC4-208ENST00000467468 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
SMC4-208ENST00000467468 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
SMC4-208ENST00000467468 SLC30A3Q99726 388 aa7.37□□□□□ -1.23
SMC4-208ENST00000467468 SLAIN2Q9P270 581 aa7.37□□□□□ -1.23
SMC4-208ENST00000467468 PHF20L1A8MW92 1017 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 PIK3R2O00459 728 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 SSFA2P28290 1259 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 CCINQ13939 588 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 KCTD17Q8N5Z5 321 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 BHMTQ93088 406 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 SAP130Q9H0E3 1048 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 RRAGCQ9HB90 399 aa7.36□□□□□ -1.23
SMC4-208ENST00000467468 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
SMC4-208ENST00000467468 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
SMC4-208ENST00000467468 SHISA8B8ZZ34 492 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 BEND7Q8N7W2 519 aaPredicted RBP7.35□□□□□ -1.23
SMC4-208ENST00000467468 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 TNFRSF25Q93038 417 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 STIM2Q9P246 746 aa7.35□□□□□ -1.23
SMC4-208ENST00000467468 CCDC9Q9Y3X0 531 aaKnown RBP7.35□□□□□ -1.23
SMC4-208ENST00000467468 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
SMC4-208ENST00000467468 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 C1orf229Q6ZS94 237 aaPredicted RBP7.34□□□□□ -1.23
SMC4-208ENST00000467468 CAPN12Q6ZSI9 719 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 RAB44Q7Z6P3 723 aaPredicted RBP7.34□□□□□ -1.23
SMC4-208ENST00000467468 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 HELQQ8TDG4 1101 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 GSX2Q9BZM3 304 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 MKL2Q9ULH7 1088 aa7.34□□□□□ -1.23
SMC4-208ENST00000467468 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.34□□□□□ -1.23
SMC4-208ENST00000467468 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 PCSK7Q16549 785 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 ETFBKMTQ8IXQ9 262 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 RGL4Q8IZJ4 473 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 KLF15Q9UIH9 416 aa7.33□□□□□ -1.24
SMC4-208ENST00000467468 RTCBQ9Y3I0 505 aaKnown RBP7.33□□□□□ -1.24
SMC4-208ENST00000467468 OPLAHO14841 1288 aa7.32□□□□□ -1.24
SMC4-208ENST00000467468 NFKB1P19838 968 aa7.32□□□□□ -1.24
SMC4-208ENST00000467468 TBC1D8BQ0IIM8 1120 aa7.32□□□□□ -1.24
SMC4-208ENST00000467468 CMTR1Q8N1G2 835 aaKnown RBP7.32□□□□□ -1.24
SMC4-208ENST00000467468 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
SMC4-208ENST00000467468 UBE2OQ9C0C9 1292 aaKnown RBP7.32□□□□□ -1.24
SMC4-208ENST00000467468 FNDC3AQ9Y2H6 1198 aaKnown RBP7.32□□□□□ -1.24
SMC4-208ENST00000467468 ADH7P40394 386 aa7.31□□□□□ -1.24
SMC4-208ENST00000467468 ZAP70P43403 619 aa7.31□□□□□ -1.24
SMC4-208ENST00000467468 NPM2Q86SE8 214 aaKnown RBP7.31□□□□□ -1.24
SMC4-208ENST00000467468 GTF3C2Q8WUA4 911 aaPredicted RBP7.31□□□□□ -1.24
SMC4-208ENST00000467468 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 XYLBO75191 536 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 MAP3K6O95382 1288 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 EGFRP00533 1210 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
SMC4-208ENST00000467468 RARAP10276 462 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 PCSK2P16519 638 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 KCNMA1Q12791 1236 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 ALKBH2Q6NS38 261 aa7.3□□□□□ -1.24
SMC4-208ENST00000467468 GNB5O14775 395 aa7.29□□□□□ -1.24
SMC4-208ENST00000467468 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
SMC4-208ENST00000467468 IRS1P35568 1242 aa7.29□□□□□ -1.24
SMC4-208ENST00000467468 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
SMC4-208ENST00000467468 KRT25Q7Z3Z0 450 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms