RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
USP11-205ENST00000467378 ZNF330Q9Y3S2 320 aaPredicted RBP24.73■■□□□ 1.55
USP11-205ENST00000467378 HOXB7P09629 217 aa24.72■■□□□ 1.55
USP11-205ENST00000467378 DUSP27Q5VZP5 1158 aa24.72■■□□□ 1.55
USP11-205ENST00000467378 PRPF40BQ6NWY9 871 aaKnown RBP24.72■■□□□ 1.55
USP11-205ENST00000467378 NBPF26B4DH59 902 aa24.71■■□□□ 1.55
USP11-205ENST00000467378 IL6STP40189 918 aaPredicted RBP24.71■■□□□ 1.55
USP11-205ENST00000467378 DEFB115Q30KQ5 88 aa24.71■■□□□ 1.55
USP11-205ENST00000467378 STYK1Q6J9G0 422 aa24.71■■□□□ 1.55
USP11-205ENST00000467378 NBPF10Q6P3W6 841 aaKnown RBP24.71■■□□□ 1.55
USP11-205ENST00000467378 NBPF15Q8N660 670 aa24.71■■□□□ 1.55
USP11-205ENST00000467378 ADAMTSL1Q8N6G6 1762 aa24.7■■□□□ 1.55
USP11-205ENST00000467378 EIF2S2P20042 333 aaKnown RBP24.7■■□□□ 1.54
USP11-205ENST00000467378 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
USP11-205ENST00000467378 MYH16Q9H6N6 1097 aa24.7■■□□□ 1.54
USP11-205ENST00000467378 TBC1D2BQ9UPU7 963 aa24.7■■□□□ 1.54
USP11-205ENST00000467378 ELL2O00472 640 aaPredicted RBP24.69■■□□□ 1.54
USP11-205ENST00000467378 SLFN5Q08AF3 891 aa24.69■■□□□ 1.54
USP11-205ENST00000467378 TSPYL6Q8N831 410 aa24.69■■□□□ 1.54
USP11-205ENST00000467378 CNBD1Q8NA66 436 aa24.69■■□□□ 1.54
USP11-205ENST00000467378 CDCA7LQ96GN5 454 aa24.69■■□□□ 1.54
USP11-205ENST00000467378 HACL1Q9UJ83 578 aa24.69■■□□□ 1.54
USP11-205ENST00000467378 RASSF10A6NK89 507 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 CCDC85CA6NKD9 419 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 SRGNP10124 158 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 ST5P78524 1137 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 MAP2K1Q02750 393 aaPredicted RBP24.68■■□□□ 1.54
USP11-205ENST00000467378 MLLT1Q03111 559 aaPredicted RBP24.68■■□□□ 1.54
USP11-205ENST00000467378 MASTLQ96GX5 879 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 SETDB2Q96T68 719 aa24.68■■□□□ 1.54
USP11-205ENST00000467378 ERBB4Q15303 1308 aa24.67■■□□□ 1.54
USP11-205ENST00000467378 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
USP11-205ENST00000467378 E9PSI1 815 aa24.67■■□□□ 1.54
USP11-205ENST00000467378 PDIA6Q15084 440 aa24.67■■□□□ 1.54
USP11-205ENST00000467378 ZNF541Q9H0D2 1346 aa24.66■■□□□ 1.54
USP11-205ENST00000467378 EPHX2P34913 555 aa24.66■■□□□ 1.54
USP11-205ENST00000467378 EXOSC9Q06265 439 aaKnown RBP24.66■■□□□ 1.54
USP11-205ENST00000467378 TRMT2AQ8IZ69 625 aaKnown RBP24.66■■□□□ 1.54
USP11-205ENST00000467378 NECTIN2Q92692 538 aa24.66■■□□□ 1.54
USP11-205ENST00000467378 ABT1Q9ULW3 272 aaKnown RBP24.66■■□□□ 1.54
USP11-205ENST00000467378 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
USP11-205ENST00000467378 HDGFL1Q5TGJ6 251 aa24.65■■□□□ 1.54
USP11-205ENST00000467378 MAP1SQ66K74 1059 aaPredicted RBP24.65■■□□□ 1.54
USP11-205ENST00000467378 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
USP11-205ENST00000467378 CNTROBQ8N137 903 aa24.65■■□□□ 1.54
USP11-205ENST00000467378 BCORQ6W2J9 1755 aa24.65■■□□□ 1.54
USP11-205ENST00000467378 TWISTNBQ3B726 338 aaPredicted RBP24.64■■□□□ 1.54
USP11-205ENST00000467378 LRP10Q7Z4F1 713 aa24.63■■□□□ 1.53
USP11-205ENST00000467378 PNMA8AQ86V59 439 aaPredicted RBP24.63■■□□□ 1.53
USP11-205ENST00000467378 ZNF277Q9NRM2 450 aaPredicted RBP24.63■■□□□ 1.53
USP11-205ENST00000467378 PCDH10Q9P2E7 1040 aa24.63■■□□□ 1.53
USP11-205ENST00000467378 RNF123Q5XPI4 1314 aa24.62■■□□□ 1.53
USP11-205ENST00000467378 VAMP4O75379 141 aa24.62■■□□□ 1.53
USP11-205ENST00000467378 MYL6BP14649 208 aa24.62■■□□□ 1.53
USP11-205ENST00000467378 FKBP4Q02790 459 aaKnown RBP eCLIP24.62■■□□□ 1.53
USP11-205ENST00000467378 PROSER3Q2NL68 480 aa24.62■■□□□ 1.53
USP11-205ENST00000467378 DDX21Q9NR30 783 aaKnown RBP eCLIP24.62■■□□□ 1.53
USP11-205ENST00000467378 CACNA1FO60840 1977 aa24.62■■□□□ 1.53
USP11-205ENST00000467378 ZBED9Q6R2W3 1325 aa24.61■■□□□ 1.53
USP11-205ENST00000467378 ANXA1P04083 346 aa24.61■■□□□ 1.53
USP11-205ENST00000467378 PAXIP1Q6ZW49 1069 aaPredicted RBP24.61■■□□□ 1.53
USP11-205ENST00000467378 BEGAINQ9BUH8 593 aa24.61■■□□□ 1.53
USP11-205ENST00000467378 TRPM7Q96QT4 1865 aa24.6■■□□□ 1.53
USP11-205ENST00000467378 C7orf43Q8WVR3 580 aa24.6■■□□□ 1.53
USP11-205ENST00000467378 CHPF2Q9P2E5 772 aa24.6■■□□□ 1.53
USP11-205ENST00000467378 DBF4Q9UBU7 674 aaPredicted RBP24.6■■□□□ 1.53
USP11-205ENST00000467378 CAMTA2O94983 1202 aa24.59■■□□□ 1.53
USP11-205ENST00000467378 DZIP3Q86Y13 1208 aaKnown RBP24.59■■□□□ 1.53
USP11-205ENST00000467378 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
USP11-205ENST00000467378 THSD7BQ9C0I4 1608 aa24.59■■□□□ 1.53
USP11-205ENST00000467378 NUP98P52948 1817 aa24.58■■□□□ 1.53
USP11-205ENST00000467378 GRM1Q13255 1194 aa24.58■■□□□ 1.53
USP11-205ENST00000467378 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
USP11-205ENST00000467378 NPR1P16066 1061 aa24.57■■□□□ 1.52
USP11-205ENST00000467378 RGS19P49795 217 aa24.57■■□□□ 1.52
USP11-205ENST00000467378 OLFM4Q6UX06 510 aa24.56■■□□□ 1.52
USP11-205ENST00000467378 TTLL7Q6ZT98 887 aa24.56■■□□□ 1.52
USP11-205ENST00000467378 NBPF5PQ86XG9 351 aaPredicted RBP24.56■■□□□ 1.52
USP11-205ENST00000467378 CAPNS2Q96L46 248 aa24.56■■□□□ 1.52
USP11-205ENST00000467378 RTKN2Q8IZC4 609 aa24.55■■□□□ 1.52
USP11-205ENST00000467378 IARSP41252 1262 aaKnown RBP24.54■■□□□ 1.52
USP11-205ENST00000467378 ECE1P42892 770 aa24.54■■□□□ 1.52
USP11-205ENST00000467378 COPS6Q7L5N1 327 aa24.54■■□□□ 1.52
USP11-205ENST00000467378 GPC2Q8N158 579 aa24.54■■□□□ 1.52
USP11-205ENST00000467378 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
USP11-205ENST00000467378 CASP8AP2Q9UKL3 1982 aa24.53■■□□□ 1.52
USP11-205ENST00000467378 FZD9O00144 591 aa24.53■■□□□ 1.52
USP11-205ENST00000467378 SYNE4Q8N205 404 aa24.53■■□□□ 1.52
USP11-205ENST00000467378 XAGE3Q8WTP9 111 aa24.53■■□□□ 1.52
USP11-205ENST00000467378 GPR101Q96P66 508 aaPredicted RBP24.53■■□□□ 1.52
USP11-205ENST00000467378 TCERG1O14776 1098 aaKnown RBP24.52■■□□□ 1.52
USP11-205ENST00000467378 CYP4F22Q6NT55 531 aa24.52■■□□□ 1.52
USP11-205ENST00000467378 PHAXQ9H814 394 aaKnown RBP24.52■■□□□ 1.52
USP11-205ENST00000467378 TSKSQ9UJT2 592 aa24.52■■□□□ 1.52
USP11-205ENST00000467378 GJA3Q9Y6H8 435 aa24.52■■□□□ 1.52
USP11-205ENST00000467378 MAP3K15Q6ZN16 1313 aa24.52■■□□□ 1.52
USP11-205ENST00000467378 ERVV-1B6SEH8 477 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 RGL2O15211 777 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 FMR1Q06787 632 aaKnown RBP eCLIP24.51■■□□□ 1.51
USP11-205ENST00000467378 AIMP1Q12904 312 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms