RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 LZTS3O60299 673 aaPredicted RBP4.87□□□□□ -1.63
SORT1-202ENST00000466471 CTDSPL2Q05D32 466 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 KCNH2Q12809 1159 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 DESI1Q6ICB0 168 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 KRT27Q7Z3Y8 459 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 PLEKHM2Q8IWE5 1019 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 SEPT12Q8IYM1 358 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 JMYQ8N9B5 988 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 ZFP42Q96MM3 310 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 CAMKK2Q96RR4 588 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 C19orf44Q9H6X5 657 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 HMX1Q9NP08 348 aaPredicted RBP4.87□□□□□ -1.63
SORT1-202ENST00000466471 ZC3H4Q9UPT8 1303 aaKnown RBP4.87□□□□□ -1.63
SORT1-202ENST00000466471 MAP3K5Q99683 1374 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 FMN1Q68DA7 1419 aa4.87□□□□□ -1.63
SORT1-202ENST00000466471 XRN1Q8IZH2 1706 aaKnown RBP4.86□□□□□ -1.63
SORT1-202ENST00000466471 FAM196BA6NMK8 535 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 ATF3P18847 181 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 ARID4AP29374 1257 aaPredicted RBP4.86□□□□□ -1.63
SORT1-202ENST00000466471 EZH2Q15910 746 aaKnown RBP4.86□□□□□ -1.63
SORT1-202ENST00000466471 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 IRF7Q92985 503 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 SIRT1Q96EB6 747 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 SLC26A8Q96RN1 970 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 ANP32EQ9BTT0 268 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 WWC3Q9ULE0 1092 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 ERBB4Q15303 1308 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 WASHC2CQ9Y4E1 1318 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 ABCC5O15440 1437 aa4.86□□□□□ -1.63
SORT1-202ENST00000466471 EIF2AK4Q9P2K8 1649 aaKnown RBP4.86□□□□□ -1.63
SORT1-202ENST00000466471 FAM83GA6ND36 823 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 SOBPA7XYQ1 873 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 H3BM21 787 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
SORT1-202ENST00000466471 CTHP32929 405 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 MCCD1P59942 119 aaPredicted RBP4.85□□□□□ -1.63
SORT1-202ENST00000466471 NNTQ13423 1086 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 KANK4Q5T7N3 995 aaPredicted RBP4.85□□□□□ -1.63
SORT1-202ENST00000466471 ZSCAN1Q8NBB4 408 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 ARHGAP31Q2M1Z3 1444 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 ATP10DQ9P241 1426 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 RPRD2Q5VT52 1461 aaKnown RBP4.85□□□□□ -1.63
SORT1-202ENST00000466471 EHBP1L1Q8N3D4 1523 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 NRAPQ86VF7 1730 aa4.85□□□□□ -1.63
SORT1-202ENST00000466471 ADCY9O60503 1353 aa4.84□□□□□ -1.63
SORT1-202ENST00000466471 SOS2Q07890 1332 aaPredicted RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 FAM181BA6NEQ2 426 aa4.84□□□□□ -1.63
SORT1-202ENST00000466471 HSP90B1P14625 803 aaKnown RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 VAMP1P23763 118 aa4.84□□□□□ -1.63
SORT1-202ENST00000466471 VARSP26640 1264 aaKnown RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 WDR4P57081 412 aaKnown RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 NR1H3Q13133 447 aa4.84□□□□□ -1.63
SORT1-202ENST00000466471 MRPL14Q6P1L8 145 aaKnown RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 UNC5CLQ8IV45 518 aa4.84□□□□□ -1.63
SORT1-202ENST00000466471 PURBQ96QR8 312 aaKnown RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
SORT1-202ENST00000466471 ZFYVE9O95405 1425 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 PIK3R4Q99570 1358 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 PLEKHG1Q9ULL1 1385 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 TIMP2P16035 220 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 CANXP27824 592 aaKnown RBP4.83□□□□□ -1.64
SORT1-202ENST00000466471 SCARF1Q14162 830 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 ARID5BQ14865 1188 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 SWI5Q1ZZU3 235 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 DNAJC14Q6Y2X3 702 aaPredicted RBP4.83□□□□□ -1.64
SORT1-202ENST00000466471 TBC1D9Q6ZT07 1266 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 NPAS3Q8IXF0 933 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 C1orf216Q8TAB5 229 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 FOXJ1Q92949 421 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 CLP1Q92989 425 aaKnown RBP4.83□□□□□ -1.64
SORT1-202ENST00000466471 PUS7Q96PZ0 661 aaKnown RBP4.83□□□□□ -1.64
SORT1-202ENST00000466471 SYT17Q9BSW7 474 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 ABCA3Q99758 1704 aa4.83□□□□□ -1.64
SORT1-202ENST00000466471 MBD5Q9P267 1494 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 NOS1P29475 1434 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 MYO5BQ9ULV0 1848 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 CFAP99D6REC4 459 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 KIF3BO15066 747 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 SSFA2P28290 1259 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 LYPD8Q6UX82 237 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 RNF135Q8IUD6 432 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 FAM174AQ8TBP5 190 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 LRRN4Q8WUT4 740 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 DDX17Q92841 729 aaKnown RBP4.82□□□□□ -1.64
SORT1-202ENST00000466471 FHDC1Q9C0D6 1143 aaPredicted RBP4.82□□□□□ -1.64
SORT1-202ENST00000466471 BCL11AQ9H165 835 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 MAP10Q9P2G4 905 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 ZMIZ1Q9ULJ6 1067 aa4.82□□□□□ -1.64
SORT1-202ENST00000466471 NOVA2Q9UNW9 492 aaKnown RBP4.82□□□□□ -1.64
SORT1-202ENST00000466471 ADGRL3Q9HAR2 1447 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 COL24A1Q17RW2 1714 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 UNCXA6NJT0 531 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 ATP5J2-PTCD1G3V325 749 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 ADH1CP00326 375 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 HNRNPMP52272 730 aaKnown RBP eCLIP4.81□□□□□ -1.645e-6■■■■□ 20.3
SORT1-202ENST00000466471 VPS72Q15906 364 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 NBPF8Q3BBV2 869 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 C6orf118Q5T5N4 469 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 NBPF14Q5TI25 921 aa4.81□□□□□ -1.64
SORT1-202ENST00000466471 TMEM164Q5U3C3 297 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms