RNA–Protein interactions for RNA: ENST00000462163.1

RPN2-207, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-207ENST00000462163 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
RPN2-207ENST00000462163 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
RPN2-207ENST00000462163 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
RPN2-207ENST00000462163 NEURL1BA8MQ27 555 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 NUTM1Q86Y26 1132 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
RPN2-207ENST00000462163 TNNQ9UQP3 1299 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 ABCC4O15439 1325 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
RPN2-207ENST00000462163 NPHP1O15259 732 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 TRIM27P14373 513 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 ST5P78524 1137 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
RPN2-207ENST00000462163 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
RPN2-207ENST00000462163 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
RPN2-207ENST00000462163 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
RPN2-207ENST00000462163 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
RPN2-207ENST00000462163 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 ATF7IPQ6VMQ6 1270 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
RPN2-207ENST00000462163 SH3TC1Q8TE82 1336 aa12.08□□□□□ -0.48
RPN2-207ENST00000462163 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
RPN2-207ENST00000462163 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
RPN2-207ENST00000462163 GCKRQ14397 625 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
RPN2-207ENST00000462163 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 SPEF2Q9C093 1822 aa12.07□□□□□ -0.48
RPN2-207ENST00000462163 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
RPN2-207ENST00000462163 JARID2Q92833 1246 aaPredicted RBP12.06□□□□□ -0.48
RPN2-207ENST00000462163 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
RPN2-207ENST00000462163 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
RPN2-207ENST00000462163 COL4A1P02462 1669 aa12.06□□□□□ -0.48
RPN2-207ENST00000462163 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
RPN2-207ENST00000462163 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
RPN2-207ENST00000462163 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 ZBTB38Q8NAP3 1195 aaPredicted RBP12.05□□□□□ -0.48
RPN2-207ENST00000462163 SYT17Q9BSW7 474 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 BRIP1Q9BX63 1249 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
RPN2-207ENST00000462163 TAF1P21675 1872 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 GRM8O00222 908 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 PLIN1O60240 522 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 RLBP1P12271 317 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
RPN2-207ENST00000462163 CHRNA5P30532 468 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
RPN2-207ENST00000462163 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
RPN2-207ENST00000462163 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 H7C1W4 665 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 IRS4O14654 1257 aaPredicted RBP12.03□□□□□ -0.48
RPN2-207ENST00000462163 DPEP1P16444 411 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 PDE6BP35913 854 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 CASP7P55210 303 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
RPN2-207ENST00000462163 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 INTS3Q68E01 1043 aaKnown RBP12.03□□□□□ -0.48
RPN2-207ENST00000462163 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
RPN2-207ENST00000462163 PANK1Q8TE04 598 aa12.03□□□□□ -0.48
RPN2-207ENST00000462163 SLX4Q8IY92 1834 aa12.02□□□□□ -0.48
RPN2-207ENST00000462163 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
RPN2-207ENST00000462163 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
RPN2-207ENST00000462163 TGFB2P61812 414 aa12.02□□□□□ -0.49
RPN2-207ENST00000462163 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
RPN2-207ENST00000462163 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
RPN2-207ENST00000462163 UTYO14607 1347 aa12.02□□□□□ -0.49
RPN2-207ENST00000462163 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
RPN2-207ENST00000462163 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
RPN2-207ENST00000462163 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
RPN2-207ENST00000462163 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
RPN2-207ENST00000462163 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
RPN2-207ENST00000462163 MEIS3Q99687 375 aa12.01□□□□□ -0.49
RPN2-207ENST00000462163 WWC3Q9ULE0 1092 aa12.01□□□□□ -0.49
RPN2-207ENST00000462163 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
RPN2-207ENST00000462163 H0YIN7 160 aa12□□□□□ -0.49
RPN2-207ENST00000462163 PDE8AO60658 829 aa12□□□□□ -0.49
RPN2-207ENST00000462163 SRGNP10124 158 aa12□□□□□ -0.49
RPN2-207ENST00000462163 KCNA3P22001 575 aa12□□□□□ -0.49
RPN2-207ENST00000462163 CTSWP56202 376 aa12□□□□□ -0.49
RPN2-207ENST00000462163 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
RPN2-207ENST00000462163 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
RPN2-207ENST00000462163 SUCLG2Q96I99 432 aa12□□□□□ -0.49
RPN2-207ENST00000462163 USP44Q9H0E7 712 aa12□□□□□ -0.49
RPN2-207ENST00000462163 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
RPN2-207ENST00000462163 MS4A1P11836 297 aa11.99□□□□□ -0.49
RPN2-207ENST00000462163 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
RPN2-207ENST00000462163 NPR1P16066 1061 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms