RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 CSB-PGBD3P0DP91 1061 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 MCM4P33991 863 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 MRPL50Q8N5N7 158 aaKnown RBP8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 TSPYL4Q9UJ04 414 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 SLIT2O94813 1529 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 UBR2Q8IWV8 1755 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 TOGARAM1Q9Y4F4 1720 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 HEG1Q9ULI3 1381 aa8.21□□□□□ -1.1
CUBNP3-201ENST00000457461 CCDC189A1A4V9 331 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 ANKRD33BA6NCL7 494 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 UBAP1LF5GYI3 381 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 DHX16O60231 1041 aaKnown RBP8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 RLBP1P12271 317 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 PHKG2P15735 406 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 TDO2P48775 406 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 CBX1P83916 185 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 C1orf141Q5JVX7 400 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 ZNF526Q8TF50 670 aaPredicted RBP8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 LGR6Q9HBX8 967 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 RGS12O14924 1447 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 LRP6O75581 1613 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 CYP27B1O15528 508 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 COQ9O75208 318 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 TRIM27P14373 513 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 KRT24Q2M2I5 525 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 UVSSAQ2YD98 709 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 CERKQ8TCT0 537 aa8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 UPF2Q9HAU5 1272 aaKnown RBP8.2□□□□□ -1.1
CUBNP3-201ENST00000457461 JCADQ9P266 1359 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 C5P01031 1676 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 HOXB7P09629 217 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 CCDC91Q7Z6B0 441 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 MSL3Q8N5Y2 521 aaKnown RBP8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 TNNQ9UQP3 1299 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 LAMB4A4D0S4 1761 aa8.19□□□□□ -1.1
CUBNP3-201ENST00000457461 ITGB4P16144 1822 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 ABCC4O15439 1325 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 IPO7O95373 1038 aaKnown RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 IL2RBP14784 551 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 MYBPC2Q14324 1141 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 TERF2Q15554 542 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 ATP2B3Q16720 1220 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 ZC3H12AQ5D1E8 599 aaKnown RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 MUM1L1Q5H9M0 696 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 MPRIPQ6WCQ1 1025 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 DZIP1LQ8IYY4 767 aaKnown RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 SDR16C5Q8N3Y7 309 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 TBC1D22AQ8WUA7 517 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 PDLIM2Q96JY6 352 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 TEX13AQ9BXU3 409 aaPredicted RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 RASSF4Q9H2L5 321 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 NOB1Q9ULX3 412 aaKnown RBP8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 ZKSCAN5Q9Y2L8 839 aa8.18□□□□□ -1.1
CUBNP3-201ENST00000457461 TRAK2O60296 914 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 EIF4A1P60842 406 aaKnown RBP8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 PIP4K2BP78356 416 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 TEFQ10587 303 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 MVPQ14764 893 aaKnown RBP8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 GOLGA6L1Q8N7Z2 621 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 ANKRD7Q92527 254 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 BORCS6Q96GS4 357 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 KDM2BQ8NHM5 1336 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 GOLGA6L6A8MZA4 724 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 GOLGA6L22H0YM25 854 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 ELL2O00472 640 aaPredicted RBP8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 LRCH2Q5VUJ6 765 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 ZCRB1Q8TBF4 217 aaKnown RBP8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 SLC52A2Q9HAB3 445 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
CUBNP3-201ENST00000457461 PTPRCP08575 1304 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 TNS2Q63HR2 1409 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 EVA1CP58658 441 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 SNRNP27Q8WVK2 155 aaKnown RBP8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 STRN4Q9NRL3 753 aa8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 MORC2Q9Y6X9 1032 aaPredicted RBP8.16□□□□□ -1.1
CUBNP3-201ENST00000457461 BTBD11A6QL63 1104 aa8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 ECM2O94769 699 aaPredicted RBP8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 REC8O95072 547 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms