RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 COL11A2P13942 1736 aaPredicted RBP17.91■□□□□ 0.46
TIMP1-205ENST00000456754 PTPRCP08575 1304 aa17.91■□□□□ 0.46
TIMP1-205ENST00000456754 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
TIMP1-205ENST00000456754 PLIN1O60240 522 aa17.9■□□□□ 0.46
TIMP1-205ENST00000456754 C3orf67Q6ZVT6 689 aa17.9■□□□□ 0.46
TIMP1-205ENST00000456754 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
TIMP1-205ENST00000456754 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.46
TIMP1-205ENST00000456754 TRIM27P14373 513 aa17.89■□□□□ 0.45
TIMP1-205ENST00000456754 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
TIMP1-205ENST00000456754 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
TIMP1-205ENST00000456754 UTP14AQ9BVJ6 771 aaKnown RBP17.89■□□□□ 0.45
TIMP1-205ENST00000456754 LAMB2P55268 1798 aa17.89■□□□□ 0.45
TIMP1-205ENST00000456754 CHRNA5P30532 468 aa17.88■□□□□ 0.45
TIMP1-205ENST00000456754 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
TIMP1-205ENST00000456754 TRMT112Q9UI30 125 aaKnown RBP17.88■□□□□ 0.45
TIMP1-205ENST00000456754 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
TIMP1-205ENST00000456754 NPHP1O15259 732 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 RLBP1P12271 317 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 HCLS1P14317 486 aaPredicted RBP17.87■□□□□ 0.45
TIMP1-205ENST00000456754 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
TIMP1-205ENST00000456754 TPTE2Q6XPS3 522 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 SYT17Q9BSW7 474 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
TIMP1-205ENST00000456754 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
TIMP1-205ENST00000456754 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 GCKRQ14397 625 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 ATF7IPQ6VMQ6 1270 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
TIMP1-205ENST00000456754 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
TIMP1-205ENST00000456754 ABCC4O15439 1325 aa17.85■□□□□ 0.45
TIMP1-205ENST00000456754 COL4A1P02462 1669 aa17.85■□□□□ 0.45
TIMP1-205ENST00000456754 DPEP1P16444 411 aa17.85■□□□□ 0.45
TIMP1-205ENST00000456754 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
TIMP1-205ENST00000456754 ST5P78524 1137 aa17.85■□□□□ 0.45
TIMP1-205ENST00000456754 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
TIMP1-205ENST00000456754 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
TIMP1-205ENST00000456754 TAF1P21675 1872 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 PANK1Q8TE04 598 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
TIMP1-205ENST00000456754 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 KCNA3P22001 575 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 CASP7P55210 303 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
TIMP1-205ENST00000456754 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.44
TIMP1-205ENST00000456754 DLEC1Q9Y238 1755 aa17.83■□□□□ 0.44
TIMP1-205ENST00000456754 H7C1W4 665 aa17.82■□□□□ 0.44
TIMP1-205ENST00000456754 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
TIMP1-205ENST00000456754 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
TIMP1-205ENST00000456754 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
TIMP1-205ENST00000456754 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
TIMP1-205ENST00000456754 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
TIMP1-205ENST00000456754 IPO8O15397 1037 aaKnown RBP17.81■□□□□ 0.44
TIMP1-205ENST00000456754 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
TIMP1-205ENST00000456754 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
TIMP1-205ENST00000456754 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
TIMP1-205ENST00000456754 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
TIMP1-205ENST00000456754 EPHA10Q5JZY3 1008 aa17.8■□□□□ 0.44
TIMP1-205ENST00000456754 MYH3P11055 1940 aa17.79■□□□□ 0.44
TIMP1-205ENST00000456754 GRM8O00222 908 aa17.79■□□□□ 0.44
TIMP1-205ENST00000456754 INTS3Q68E01 1043 aaKnown RBP17.79■□□□□ 0.44
TIMP1-205ENST00000456754 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
TIMP1-205ENST00000456754 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
TIMP1-205ENST00000456754 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
TIMP1-205ENST00000456754 SRGNP10124 158 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 PDE6BP35913 854 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
TIMP1-205ENST00000456754 TGFB2P61812 414 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 KAZALD1Q96I82 304 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 MEIS3Q99687 375 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
TIMP1-205ENST00000456754 RIC1Q4ADV7 1423 aa17.78■□□□□ 0.44
TIMP1-205ENST00000456754 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
TIMP1-205ENST00000456754 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
TIMP1-205ENST00000456754 H0YIN7 160 aa17.77■□□□□ 0.44
TIMP1-205ENST00000456754 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
TIMP1-205ENST00000456754 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
TIMP1-205ENST00000456754 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.44
TIMP1-205ENST00000456754 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
TIMP1-205ENST00000456754 FOXO4P98177 505 aa17.76■□□□□ 0.43
TIMP1-205ENST00000456754 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
TIMP1-205ENST00000456754 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
TIMP1-205ENST00000456754 UTYO14607 1347 aa17.75■□□□□ 0.43
TIMP1-205ENST00000456754 YBX3P16989 372 aaKnown RBP eCLIP17.75■□□□□ 0.436e-10■■□□□ 13.5
TIMP1-205ENST00000456754 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
TIMP1-205ENST00000456754 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
TIMP1-205ENST00000456754 SEC31BQ9NQW1 1179 aa17.75■□□□□ 0.43
TIMP1-205ENST00000456754 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
TIMP1-205ENST00000456754 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms