RNA–Protein interactions for RNA: ENST00000454349.6

TNRC6B-206, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNRC6B, Length 18,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-206ENST00000454349 MED4Q9NPJ6 270 aa6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 CCDC129Q6ZRS4 1044 aa6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 STK24Q9Y6E0 443 aa6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 ATP2A3Q93084 1043 aa6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 CALR3Q96L12 384 aaKnown RBP6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 MPHOSPH9Q99550 1183 aa6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 MTRF1LQ9UGC7 380 aaKnown RBP6.05□□□□□ -1.44
TNRC6B-206ENST00000454349 PPP4R3AQ6IN85 833 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 MSANTD4Q8NCY6 345 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 UBE2HP62256 183 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 STK38Q15208 465 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 SNX16P57768 344 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 PRPF31Q8WWY3 499 aaKnown RBP6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 SEPT8Q92599 483 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 NCAPD3P42695 1498 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 FYCO1Q9BQS8 1478 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 BLVRAP53004 296 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 CALCOCO2Q13137 446 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 RNF187Q5TA31 235 aaPredicted RBP6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 FHOD3Q2V2M9 1422 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 SRGAP1Q7Z6B7 1085 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 TEKT2Q9UIF3 430 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 DYNC1I2Q13409 638 aaKnown RBP6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 ANKRD24Q8TF21 1146 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 FRMD3A2A2Y4 597 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 FAM76AQ8TAV0 307 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 TPX2Q9ULW0 747 aaKnown RBP6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 P3H4Q92791 437 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 PPP2R5AQ15172 486 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
TNRC6B-206ENST00000454349 CCDC124Q96CT7 223 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TBC1D31Q96DN5 1066 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TMEM232C9JQI7 657 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 CYLC1P35663 651 aaPredicted RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TTC5Q8N0Z6 440 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 RBM27Q9P2N5 1060 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 ANGPTL3Q9Y5C1 460 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 U3KPZ7 1027 aaPredicted RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 PIP4K2CQ8TBX8 421 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 A0A1W2PRG0 241 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 DIABLOQ9NR28 239 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 NOP14P78316 857 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 C1orf141Q5JVX7 400 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 ODF2LQ9ULJ1 636 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 LMAN1P49257 510 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 WASHC4Q2M389 1173 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 CCDC92Q53HC0 331 aaPredicted RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 PRPF38AQ8NAV1 312 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 USP6NLQ92738 828 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 MICALL1Q8N3F8 863 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 DDX27Q96GQ7 796 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TPCN1Q9ULQ1 816 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 ERICH4A6NGS2 130 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TSPY2A6NKD2 308 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 PPFIA4O75335 1185 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TSPY3P0CV98 308 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TSPY8P0CW00 308 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 TSPY1Q01534 308 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 PPP1R14CQ8TAE6 165 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 PNISRQ8TF01 805 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 MPHOSPH6Q99547 160 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 DTNBO60941 627 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 STRN4Q9NRL3 753 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 CTTNBP2NLQ9P2B4 639 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 CPLX4Q7Z7G2 160 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 UBE4BO95155 1302 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 CCDC69A6NI79 296 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 LMNAP02545 664 aaKnown RBP6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 JADE2Q9NQC1 790 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 ERICH3Q5RHP9 1530 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 APOBRQ0VD83 1088 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 ARHGAP18Q8N392 663 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 BICD1Q96G01 975 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 KIF2CQ99661 725 aa6.03□□□□□ -1.44
TNRC6B-206ENST00000454349 RUNDC3BQ96NL0 473 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 MAPK8IP2Q13387 824 aaPredicted RBP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 EP400NLQ6ZTU2 488 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 PAWRQ96IZ0 340 aaKnown RBP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 EFCAB5A4FU69 1503 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 RANBP1P43487 201 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 MCF2L2Q86YR7 1114 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 GNL3LQ9NVN8 582 aaKnown RBP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 PRR16Q569H4 304 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 RPUSD2Q8IZ73 545 aaKnown RBP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 E9PMD0 336 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 TMEM266Q2M3C6 531 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 CCDC102BQ68D86 513 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 MRPS25P82663 173 aaKnown RBP6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 DUSP27Q5VZP5 1158 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 USP47Q96K76 1375 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 TNNC1P63316 161 aa6.02□□□□□ -1.45
TNRC6B-206ENST00000454349 PDXDC1Q6P996 788 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms