RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 ASB16Q96NS5 453 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 BRD7Q9NPI1 651 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 USP20Q9Y2K6 914 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 TMC7Q7Z402 723 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 CMTR1Q8N1G2 835 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GTPBP3Q969Y2 492 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KHNYNO15037 678 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 EFSO43281 561 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 EPB42P16452 691 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 PCSK2P16519 638 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 ERCC3P19447 782 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNQ4P56696 695 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 SFSWAPQ12872 951 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 GJD3Q8N144 294 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNMB2Q9Y691 235 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FOXR1Q6PIV2 292 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FAM129BQ96TA1 746 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FNDC3AQ9Y2H6 1198 aaKnown RBP8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 CDC14CA4D256 554 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 IGHA2P01877 340 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 C8orf34Q49A92 452 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 TTC16Q8NEE8 873 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 STRN4Q9NRL3 753 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 TRIP4Q15650 581 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 DMRTB1Q96MA1 342 aa8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 UBAP1LF5GYI3 381 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 EGFRP00533 1210 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 VEGFBP49765 207 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 PLCB3Q01970 1234 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 EHHADHQ08426 723 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 TRERF1Q96PN7 1200 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 PHF24Q9UPV7 400 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 A6NHS1 94 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR25O00155 361 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR182O15218 404 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 TREHO43280 583 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 XYLBO75191 536 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 DSC3Q14574 896 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 CD33P20138 364 aa8.56□□□□□ -1.04
HMGB1P26-201ENST00000452520 H3BM21 787 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 FGFR3P22607 806 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 CTBSQ01459 385 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 CCINQ13939 588 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 PDE12Q6L8Q7 609 aaKnown RBP8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ZNF438Q7Z4V0 828 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ALKBH8Q96BT7 664 aaKnown RBP8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 SASH3O75995 380 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 TARSP26639 723 aaKnown RBP8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR161Q8N6U8 529 aaKnown RBP8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
HMGB1P26-201ENST00000452520 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
HMGB1P26-201ENST00000452520 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 NEFLP07196 543 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 FMR1Q06787 632 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 KRT25Q7Z3Z0 450 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 C2CD2LO14523 706 aa8.51□□□□□ -1.05
HMGB1P26-201ENST00000452520 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms