RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
ITGB4-202ENST00000449880 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-202ENST00000449880 EXOC6BQ9Y2D4 811 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 SPATA31E1Q6ZUB1 1445 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 GJB2P29033 226 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 TTC31Q49AM3 519 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-202ENST00000449880 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 PYM1Q9BRP8 204 aaKnown RBP16.07■□□□□ 0.16
ITGB4-202ENST00000449880 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
ITGB4-202ENST00000449880 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 RASSF4Q9H2L5 321 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 SPECC1LQ69YQ0 1117 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 F6X3S4 739 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 CCDC91Q7Z6B0 441 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 UBAC1Q9BSL1 405 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 HMG20BQ9P0W2 317 aa16.06■□□□□ 0.16
ITGB4-202ENST00000449880 FGFR1OPO95684 399 aaKnown RBP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 SMARCA5O60264 1052 aaPredicted RBP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ZHX3Q9H4I2 956 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ZFYVE9O95405 1425 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ZSCAN29Q8IWY8 852 aaPredicted RBP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ATP10AO60312 1499 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 SKILP12757 684 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
ITGB4-202ENST00000449880 CCDC175P0C221 793 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 TDO2P48775 406 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 ZMYM3Q14202 1370 aa16.05■□□□□ 0.16
ITGB4-202ENST00000449880 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 PREX2Q70Z35 1606 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 STARD3NLO95772 234 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 MPRIPQ6WCQ1 1025 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 INSRP06213 1382 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
ITGB4-202ENST00000449880 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 NPATQ14207 1427 aa16.04■□□□□ 0.16
ITGB4-202ENST00000449880 OPA1O60313 960 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 HSF2BPO75031 334 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 GNG11P61952 73 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
ITGB4-202ENST00000449880 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 HSPA4P34932 840 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
ITGB4-202ENST00000449880 CCDC12Q8WUD4 166 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-202ENST00000449880 A0A1B0GUL7 405 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 FLIIQ13045 1269 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.16
ITGB4-202ENST00000449880 LRP2BPQ9P2M1 347 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.02■□□□□ 0.16
ITGB4-202ENST00000449880 NEO1Q92859 1461 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
ITGB4-202ENST00000449880 IFFO1Q0D2I5 559 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 NBPF11Q86T75 865 aa16.02■□□□□ 0.16
ITGB4-202ENST00000449880 CTAGE15A4D2H0 777 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 CTAGE8P0CG41 777 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 ZNF445P59923 1031 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 CTAGE6Q86UF2 777 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 CTAGE4Q8IX94 777 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 EVI5LQ96CN4 794 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 ZNF287Q9HBT7 754 aa16.02■□□□□ 0.15
ITGB4-202ENST00000449880 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 CHD1O14646 1710 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
ITGB4-202ENST00000449880 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
ITGB4-202ENST00000449880 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 DESP17661 470 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 LARP1Q6PKG0 1096 aaKnown RBP16.01■□□□□ 0.15
ITGB4-202ENST00000449880 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 CTAGE1Q96RT6 745 aa16.01■□□□□ 0.15
ITGB4-202ENST00000449880 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 ANO6Q4KMQ2 910 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16■□□□□ 0.15
ITGB4-202ENST00000449880 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 ZNF76P36508 570 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 TICAM2Q86XR7 235 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 TSG101Q99816 390 aa16■□□□□ 0.15
ITGB4-202ENST00000449880 KDM5CP41229 1560 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms