RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
HDLBP-223ENST00000449864 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
HDLBP-223ENST00000449864 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
HDLBP-223ENST00000449864 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
HDLBP-223ENST00000449864 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
HDLBP-223ENST00000449864 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
HDLBP-223ENST00000449864 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
HDLBP-223ENST00000449864 IL16Q14005 1332 aa20.41■□□□□ 0.86
HDLBP-223ENST00000449864 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
HDLBP-223ENST00000449864 ZC3H4Q9UPT8 1303 aaKnown RBP20.41■□□□□ 0.86
HDLBP-223ENST00000449864 TAF1P21675 1872 aa20.41■□□□□ 0.86
HDLBP-223ENST00000449864 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 GOLGA2Q08379 1002 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 CRY2Q49AN0 593 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
HDLBP-223ENST00000449864 LTBP3Q9NS15 1303 aa20.39■□□□□ 0.85
HDLBP-223ENST00000449864 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
HDLBP-223ENST00000449864 PRELPP51888 382 aa20.38■□□□□ 0.85
HDLBP-223ENST00000449864 TRMT112Q9UI30 125 aaKnown RBP20.38■□□□□ 0.85
HDLBP-223ENST00000449864 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
HDLBP-223ENST00000449864 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
HDLBP-223ENST00000449864 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
HDLBP-223ENST00000449864 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
HDLBP-223ENST00000449864 NLRP3Q96P20 1036 aa20.37■□□□□ 0.85
HDLBP-223ENST00000449864 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
HDLBP-223ENST00000449864 FANCIQ9NVI1 1328 aa20.36■□□□□ 0.85
HDLBP-223ENST00000449864 MYH3P11055 1940 aa20.36■□□□□ 0.85
HDLBP-223ENST00000449864 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
HDLBP-223ENST00000449864 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
HDLBP-223ENST00000449864 PHAXQ9H814 394 aaKnown RBP20.36■□□□□ 0.85
HDLBP-223ENST00000449864 NMRK2Q9NPI5 230 aa20.36■□□□□ 0.85
HDLBP-223ENST00000449864 KIF3CO14782 793 aa20.35■□□□□ 0.85
HDLBP-223ENST00000449864 C3orf67Q6ZVT6 689 aa20.35■□□□□ 0.85
HDLBP-223ENST00000449864 C7orf43Q8WVR3 580 aa20.35■□□□□ 0.85
HDLBP-223ENST00000449864 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
HDLBP-223ENST00000449864 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
HDLBP-223ENST00000449864 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
HDLBP-223ENST00000449864 HOXA10P31260 410 aaPredicted RBP20.34■□□□□ 0.85
HDLBP-223ENST00000449864 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
HDLBP-223ENST00000449864 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
HDLBP-223ENST00000449864 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.85
HDLBP-223ENST00000449864 FKBP4Q02790 459 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■■□□□ 12.8
HDLBP-223ENST00000449864 OLFM4Q6UX06 510 aa20.33■□□□□ 0.85
HDLBP-223ENST00000449864 C16orf71Q8IYS4 520 aaPredicted RBP20.33■□□□□ 0.85
HDLBP-223ENST00000449864 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
HDLBP-223ENST00000449864 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
HDLBP-223ENST00000449864 ISCA1Q9BUE6 129 aa20.33■□□□□ 0.85
HDLBP-223ENST00000449864 PPEF1O14829 653 aaPredicted RBP20.32■□□□□ 0.84
HDLBP-223ENST00000449864 LRRC37AA6NMS7 1700 aa20.31■□□□□ 0.84
HDLBP-223ENST00000449864 TCERG1O14776 1098 aaKnown RBP20.31■□□□□ 0.84
HDLBP-223ENST00000449864 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
HDLBP-223ENST00000449864 MYD88Q99836 296 aa20.31■□□□□ 0.84
HDLBP-223ENST00000449864 ABCC4O15439 1325 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 SPEF2Q9C093 1822 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 GLTPD2A6NH11 291 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
HDLBP-223ENST00000449864 MYH16Q9H6N6 1097 aa20.3■□□□□ 0.84
HDLBP-223ENST00000449864 SNED1Q8TER0 1413 aa20.29■□□□□ 0.84
HDLBP-223ENST00000449864 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
HDLBP-223ENST00000449864 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
HDLBP-223ENST00000449864 RRAGCQ9HB90 399 aa20.29■□□□□ 0.84
HDLBP-223ENST00000449864 ZNF277Q9NRM2 450 aaPredicted RBP20.29■□□□□ 0.84
HDLBP-223ENST00000449864 SCN4AP35499 1836 aa20.29■□□□□ 0.84
HDLBP-223ENST00000449864 TOMM70O94826 608 aa20.28■□□□□ 0.84
HDLBP-223ENST00000449864 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
HDLBP-223ENST00000449864 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
HDLBP-223ENST00000449864 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
HDLBP-223ENST00000449864 EXOSC9Q06265 439 aaKnown RBP20.27■□□□□ 0.84
HDLBP-223ENST00000449864 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
HDLBP-223ENST00000449864 MAP3K2Q9Y2U5 619 aa20.27■□□□□ 0.84
HDLBP-223ENST00000449864 IARSP41252 1262 aaKnown RBP20.26■□□□□ 0.83
HDLBP-223ENST00000449864 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
HDLBP-223ENST00000449864 PSMD1Q99460 953 aa20.26■□□□□ 0.83
HDLBP-223ENST00000449864 METTL22Q9BUU2 404 aaPredicted RBP20.26■□□□□ 0.83
HDLBP-223ENST00000449864 CWC25Q9NXE8 425 aaPredicted RBP20.26■□□□□ 0.83
HDLBP-223ENST00000449864 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
HDLBP-223ENST00000449864 IRS4O14654 1257 aaPredicted RBP20.25■□□□□ 0.83
HDLBP-223ENST00000449864 NEXNQ0ZGT2 675 aa20.25■□□□□ 0.83
HDLBP-223ENST00000449864 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
HDLBP-223ENST00000449864 CCDC191Q8NCU4 936 aa20.25■□□□□ 0.83
HDLBP-223ENST00000449864 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
HDLBP-223ENST00000449864 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
HDLBP-223ENST00000449864 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-223ENST00000449864 GRAPQ13588 217 aa20.24■□□□□ 0.83
HDLBP-223ENST00000449864 G2E3Q7L622 706 aa20.24■□□□□ 0.83
HDLBP-223ENST00000449864 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-223ENST00000449864 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-223ENST00000449864 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
HDLBP-223ENST00000449864 BBOX1O75936 387 aa20.23■□□□□ 0.83
HDLBP-223ENST00000449864 FLIIQ13045 1269 aa20.23■□□□□ 0.83
HDLBP-223ENST00000449864 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
HDLBP-223ENST00000449864 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
HDLBP-223ENST00000449864 CCER2I3L3R5 266 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms