RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 USP42Q9H9J4 1324 aaKnown RBP9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 PI4KAP2A4QPH2 592 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 DDX58O95786 925 aaKnown RBP9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 GYS1P13807 737 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 HLFQ16534 295 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 PI4KAP1Q8N8J0 262 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 LAMB4A4D0S4 1761 aa9.62□□□□□ -0.87
AC004540.1-206ENST00000448056 PTPRCP08575 1304 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 SLC16A10Q8TF71 515 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 MAP3K2Q9Y2U5 619 aa9.61□□□□□ -0.87
AC004540.1-206ENST00000448056 F6X3S4 739 aa9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 FRAT1Q92837 279 aaPredicted RBP9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 ZNF652Q9Y2D9 606 aa9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 ADCY9O60503 1353 aa9.6□□□□□ -0.87
AC004540.1-206ENST00000448056 UBR3Q6ZT12 1888 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 KIF16BQ96L93 1317 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 TM4SF1P30408 202 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 ZKSCAN2Q63HK3 967 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 ATF7IPQ6VMQ6 1270 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 ZNF34Q8IZ26 560 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 API5Q9BZZ5 524 aaKnown RBP9.59□□□□□ -0.87
AC004540.1-206ENST00000448056 PLIN1O60240 522 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 ZBTB7AO95365 584 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 TRIM27P14373 513 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 NFIXQ14938 502 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 HSP90AB3PQ58FF7 597 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 EFCAB3Q8N7B9 438 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 MYD88Q99836 296 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 ISCA1Q9BUE6 129 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 MTFR1LQ9H019 292 aa9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
AC004540.1-206ENST00000448056 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 IGKV5-2P06315 115 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 GPTP24298 496 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 SLC4A10Q6U841 1118 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
AC004540.1-206ENST00000448056 CACNA1FO60840 1977 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 ATMINO43313 823 aaPredicted RBP9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 MMP10P09238 476 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 PARP10Q53GL7 1025 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 TNNQ9UQP3 1299 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 QSER1Q2KHR3 1735 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 ATP10DQ9P241 1426 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
AC004540.1-206ENST00000448056 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 ALDH1L1O75891 902 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 MS4A1P11836 297 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 RLBP1P12271 317 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 CCT4P50991 539 aaKnown RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 DDR1Q08345 913 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 GCKRQ14397 625 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 CWF19L2Q2TBE0 894 aaKnown RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 PPP1R42Q7Z4L9 355 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 UTP14AQ9BVJ6 771 aaKnown RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 CWC25Q9NXE8 425 aaPredicted RBP9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 PARP3Q9Y6F1 533 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 ABCC4O15439 1325 aa9.55□□□□□ -0.88
AC004540.1-206ENST00000448056 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms