RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 KIF2AO00139 706 aaPredicted RBP13.54□□□□□ -0.24
FN1-212ENST00000446046 GPTP24298 496 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 DDX12PQ92771 950 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 ACEP12821 1306 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
FN1-212ENST00000446046 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
FN1-212ENST00000446046 STAMBPO95630 424 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 MAP9Q49MG5 647 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
FN1-212ENST00000446046 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
FN1-212ENST00000446046 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
FN1-212ENST00000446046 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.24
FN1-212ENST00000446046 CCDC174Q6PII3 467 aa13.52□□□□□ -0.24
FN1-212ENST00000446046 TTC12Q9H892 705 aaPredicted RBP13.52□□□□□ -0.24
FN1-212ENST00000446046 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.24
FN1-212ENST00000446046 GNAT2P19087 354 aa13.52□□□□□ -0.24
FN1-212ENST00000446046 IL2RBP14784 551 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 C14orf93Q9H972 538 aaKnown RBP13.52□□□□□ -0.25
FN1-212ENST00000446046 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 FLIIQ13045 1269 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 NME9Q86XW9 330 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
FN1-212ENST00000446046 SOS1Q07889 1333 aaPredicted RBP13.52□□□□□ -0.25
FN1-212ENST00000446046 DNMT1P26358 1616 aaKnown RBP13.52□□□□□ -0.25
FN1-212ENST00000446046 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
FN1-212ENST00000446046 GOLGA8BA8MQT2 603 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 KIAA0754O94854 1291 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 CEBPAP49715 358 aaPredicted RBP13.51□□□□□ -0.25
FN1-212ENST00000446046 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 UBA5Q9GZZ9 404 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 ANKRD2Q9GZV1 360 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 USO1O60763 962 aaKnown RBP13.51□□□□□ -0.25
FN1-212ENST00000446046 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
FN1-212ENST00000446046 UBE3BQ7Z3V4 1068 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
FN1-212ENST00000446046 CKAP2LQ8IYA6 745 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 NCOA7Q8NI08 942 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 CTNNA2P26232 953 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
FN1-212ENST00000446046 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 GBP3Q9H0R5 595 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 MCM5P33992 734 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 SH2D4AQ9H788 454 aa13.5□□□□□ -0.25
FN1-212ENST00000446046 TFCP2L1Q9NZI6 479 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 ESR2Q92731 530 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 STX6O43752 255 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
FN1-212ENST00000446046 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 UBA7P41226 1012 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 IFIT1BQ5T764 474 aaKnown RBP13.49□□□□□ -0.25
FN1-212ENST00000446046 ZSCAN12O43309 604 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 TBC1D5Q92609 795 aa13.49□□□□□ -0.25
FN1-212ENST00000446046 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
FN1-212ENST00000446046 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
FN1-212ENST00000446046 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 BICD1Q96G01 975 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 ABCC2Q92887 1545 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 SKIDA1Q1XH10 827 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 INCENPQ9NQS7 918 aa13.48□□□□□ -0.25
FN1-212ENST00000446046 CAVIN2O95810 425 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 ATP10BO94823 1461 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
FN1-212ENST00000446046 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
FN1-212ENST00000446046 MYZAPP0CAP1 466 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 SREK1Q8WXA9 508 aaKnown RBP13.47□□□□□ -0.25
FN1-212ENST00000446046 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 CCDC66A2RUB6 948 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 BRDTQ58F21 947 aaPredicted RBP13.47□□□□□ -0.25
FN1-212ENST00000446046 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 CNNM3Q8NE01 707 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 KIF5CO60282 957 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 WDR62O43379 1518 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms