RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SPA17Q15506 151 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
FN1-211ENST00000443816 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 IL16Q14005 1332 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
FN1-211ENST00000443816 TNNI2P48788 182 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
FN1-211ENST00000443816 KRT23Q9C075 422 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
FN1-211ENST00000443816 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 TMTC2Q8N394 836 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 EYA3Q99504 573 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
FN1-211ENST00000443816 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
FN1-211ENST00000443816 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 GRM1Q13255 1194 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 FERMT1Q9BQL6 677 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
FN1-211ENST00000443816 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 NCOA7Q8NI08 942 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
FN1-211ENST00000443816 VAT1LQ9HCJ6 419 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 CTAGE5O15320 804 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
FN1-211ENST00000443816 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
FN1-211ENST00000443816 ERMNQ8TAM6 284 aa12.97□□□□□ -0.33
FN1-211ENST00000443816 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 NUP160Q12769 1436 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 H0YHG0 523 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 GNAQP50148 359 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
FN1-211ENST00000443816 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
FN1-211ENST00000443816 CHD1O14646 1710 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 CA8P35219 290 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 KANK3Q6NY19 840 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 WDR62O43379 1518 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 ERLIN1O75477 346 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 STX8Q9UNK0 236 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 NPATQ14207 1427 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 PLS1Q14651 629 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.34
FN1-211ENST00000443816 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.34
FN1-211ENST00000443816 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 USP37Q86T82 979 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 MCM5P33992 734 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
FN1-211ENST00000443816 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
FN1-211ENST00000443816 CCDC91Q7Z6B0 441 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
FN1-211ENST00000443816 GRM8O00222 908 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
FN1-211ENST00000443816 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 BICD1Q96G01 975 aa12.95□□□□□ -0.34
FN1-211ENST00000443816 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
FN1-211ENST00000443816 CHPF2Q9P2E5 772 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 ATP10AO60312 1499 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 CYP7A1P22680 504 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 ESR2Q92731 530 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 GNAT2P19087 354 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
FN1-211ENST00000443816 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
FN1-211ENST00000443816 LIG1P18858 919 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 CCDC174Q6PII3 467 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 WTAPQ15007 396 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 KLHL10Q6JEL2 608 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 FLT4P35916 1363 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
FN1-211ENST00000443816 ATP2B3Q16720 1220 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
FN1-211ENST00000443816 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 LEKR1Q6ZMV7 388 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 CENPHQ9H3R5 247 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 KIF4AO95239 1232 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 UBA7P41226 1012 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms