RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 HDGFL2Q7Z4V5 671 aaPredicted RBP9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 KNSTRNQ9Y448 316 aa9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 LRRC7Q96NW7 1537 aa9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 CPSF1Q10570 1443 aaKnown RBP9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 TMEM94Q12767 1356 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 CGNL1Q0VF96 1302 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 FOXC1Q12948 553 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 RALBP1Q15311 655 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 NUDT16Q96DE0 195 aaKnown RBP9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 KCTD15Q96SI1 283 aaPredicted RBP9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.86
R3HDM1-210ENST00000443537 POLR3AO14802 1390 aaPredicted RBP9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 WNT7AO00755 349 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 ZNF598Q86UK7 904 aaKnown RBP9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 DEPDC4Q8N2C3 294 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 PANK3Q9H999 370 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 DOLKQ9UPQ8 538 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
R3HDM1-210ENST00000443537 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 ATF3P18847 181 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 LTBP4Q8N2S1 1624 aa9.63□□□□□ -0.87
R3HDM1-210ENST00000443537 CCER2I3L3R5 266 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 MAP4K5Q9Y4K4 846 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
R3HDM1-210ENST00000443537 TTC21AQ8NDW8 1320 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 ZNF335Q9H4Z2 1342 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 FSHRP23945 695 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 NCOA4Q13772 614 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 SLC12A5Q9H2X9 1139 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 PRKRIP1Q9H875 184 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 USP6P35125 1406 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 MST1RQ04912 1400 aa9.61□□□□□ -0.87
R3HDM1-210ENST00000443537 C1orf167Q5SNV9 1468 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 PRR36Q9H6K5 1346 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 ESPNB1AK53 854 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 EML3Q32P44 896 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
R3HDM1-210ENST00000443537 ALDH1A1P00352 501 aa9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 TSGA10IPQ3SY00 556 aa9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 PLEKHM2Q8IWE5 1019 aa9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 CDK15Q96Q40 435 aa9.59□□□□□ -0.87
R3HDM1-210ENST00000443537 MYBBP1AQ9BQG0 1328 aaKnown RBP9.58□□□□□ -0.88
R3HDM1-210ENST00000443537 SIAH2O43255 324 aa9.58□□□□□ -0.88
R3HDM1-210ENST00000443537 LZTS3O60299 673 aaPredicted RBP9.58□□□□□ -0.88
R3HDM1-210ENST00000443537 NGDNQ8NEJ9 315 aaKnown RBP9.58□□□□□ -0.88
R3HDM1-210ENST00000443537 MKRN1Q9UHC7 482 aaKnown RBP9.58□□□□□ -0.88
R3HDM1-210ENST00000443537 ACEP12821 1306 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 NPHP3Q7Z494 1330 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 SSH2Q76I76 1423 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 NHSL1Q5SYE7 1610 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 TRPM3Q9HCF6 1732 aaPredicted RBP9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 TTC24A2A3L6 582 aaPredicted RBP9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 ADH1CP00326 375 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 MPNDQ8N594 471 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 NOD1Q9Y239 953 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
R3HDM1-210ENST00000443537 TNFRSF10AO00220 468 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 GRM5P41594 1212 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 NR5A1Q13285 461 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 CYP4X1Q8N118 509 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-210ENST00000443537 PIK3C2AO00443 1686 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 ALS2Q96Q42 1657 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 SBNO1A3KN83 1393 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 USP31Q70CQ4 1352 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 ERVH48-1M5A8F1 160 aa9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
R3HDM1-210ENST00000443537 PSME1Q06323 249 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms