RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 F13A1P00488 732 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 AMOTQ4VCS5 1084 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 ZNF790Q6PG37 636 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.45
SCAP-207ENST00000441517 PIK3C2BO00750 1634 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 TAF6LQ9Y6J9 622 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
SCAP-207ENST00000441517 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
SCAP-207ENST00000441517 BRD1O95696 1058 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
SCAP-207ENST00000441517 HSPA4P34932 840 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 Q6ZUG5 572 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 CNNM1Q9NRU3 951 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 KIAA0232Q92628 1395 aa17.82■□□□□ 0.44
SCAP-207ENST00000441517 IBTKQ9P2D0 1353 aaPredicted RBP17.82■□□□□ 0.44
SCAP-207ENST00000441517 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
SCAP-207ENST00000441517 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
SCAP-207ENST00000441517 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
SCAP-207ENST00000441517 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
SCAP-207ENST00000441517 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
SCAP-207ENST00000441517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
SCAP-207ENST00000441517 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
SCAP-207ENST00000441517 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
SCAP-207ENST00000441517 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
SCAP-207ENST00000441517 TRMT1Q9NXH9 659 aaKnown RBP17.8■□□□□ 0.44
SCAP-207ENST00000441517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-207ENST00000441517 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
SCAP-207ENST00000441517 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-207ENST00000441517 ATP7BP35670 1465 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
SCAP-207ENST00000441517 C16orf45Q96MC5 204 aaPredicted RBP17.79■□□□□ 0.44
SCAP-207ENST00000441517 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
SCAP-207ENST00000441517 CCDC171Q6TFL3 1326 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 RAD50Q92878 1312 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 CCDC73Q6ZRK6 1079 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 IGSF3O75054 1194 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
SCAP-207ENST00000441517 DNAJC25Q9H1X3 360 aa17.78■□□□□ 0.44
SCAP-207ENST00000441517 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
SCAP-207ENST00000441517 SASH1O94885 1247 aa17.78■□□□□ 0.44
SCAP-207ENST00000441517 ARHGAP31Q2M1Z3 1444 aa17.78■□□□□ 0.44
SCAP-207ENST00000441517 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
SCAP-207ENST00000441517 SLC27A2O14975 620 aa17.77■□□□□ 0.44
SCAP-207ENST00000441517 MAP3K11Q16584 847 aa17.77■□□□□ 0.44
SCAP-207ENST00000441517 MAP2P11137 1827 aaKnown RBP17.77■□□□□ 0.44
SCAP-207ENST00000441517 COL3A1P02461 1466 aaPredicted RBP17.77■□□□□ 0.44
SCAP-207ENST00000441517 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
SCAP-207ENST00000441517 LSG1Q9H089 658 aaKnown RBP17.77■□□□□ 0.44
SCAP-207ENST00000441517 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCAP-207ENST00000441517 LIG1P18858 919 aa17.77■□□□□ 0.43
SCAP-207ENST00000441517 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
SCAP-207ENST00000441517 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
SCAP-207ENST00000441517 UBE2HP62256 183 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-207ENST00000441517 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-207ENST00000441517 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
SCAP-207ENST00000441517 ANAPC15P60006 121 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
SCAP-207ENST00000441517 PDCP20941 246 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 TRDNQ13061 729 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 STK38Q15208 465 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
SCAP-207ENST00000441517 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 KINO60870 393 aaKnown RBP17.75■□□□□ 0.43
SCAP-207ENST00000441517 SMC2O95347 1197 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 PI16Q6UXB8 463 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 SYNE3Q6ZMZ3 975 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.75■□□□□ 0.439e-6■■□□□ 14.3
SCAP-207ENST00000441517 V9GYY5 206 aaPredicted RBP17.75■□□□□ 0.43
SCAP-207ENST00000441517 SPDYE4A6NLX3 237 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 METTL24Q5JXM2 366 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 ZKSCAN5Q9Y2L8 839 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
SCAP-207ENST00000441517 ZNF445P59923 1031 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 GCKRQ14397 625 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 TPD52L1Q16890 204 aaPredicted RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 CCAR2Q8N163 923 aaKnown RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 ARHGEF10O15013 1369 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms