RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 HSPA6P17066 643 aa22.73■■□□□ 1.23
CCDC188-201ENST00000439765 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
CCDC188-201ENST00000439765 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
CCDC188-201ENST00000439765 NFKBIEO00221 500 aa22.72■■□□□ 1.23
CCDC188-201ENST00000439765 PRELPP51888 382 aa22.72■■□□□ 1.23
CCDC188-201ENST00000439765 STYK1Q6J9G0 422 aa22.72■■□□□ 1.23
CCDC188-201ENST00000439765 CHMP4AQ9BY43 222 aa22.72■■□□□ 1.23
CCDC188-201ENST00000439765 ANKRD13DQ6ZTN6 518 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 ZNF34Q8IZ26 560 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 PLBD2Q8NHP8 589 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 CNKSR1Q969H4 720 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 LAMB2P55268 1798 aa22.71■■□□□ 1.23
CCDC188-201ENST00000439765 IBTKQ9P2D0 1353 aaPredicted RBP22.7■■□□□ 1.22
CCDC188-201ENST00000439765 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
CCDC188-201ENST00000439765 E9PSI1 815 aa22.7■■□□□ 1.22
CCDC188-201ENST00000439765 NUTM1Q86Y26 1132 aa22.7■■□□□ 1.22
CCDC188-201ENST00000439765 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.22
CCDC188-201ENST00000439765 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
CCDC188-201ENST00000439765 VAMP4O75379 141 aa22.69■■□□□ 1.22
CCDC188-201ENST00000439765 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
CCDC188-201ENST00000439765 TPTE2Q6XPS3 522 aa22.69■■□□□ 1.22
CCDC188-201ENST00000439765 LTBP3Q9NS15 1303 aa22.68■■□□□ 1.22
CCDC188-201ENST00000439765 KLRG2A4D1S0 409 aaPredicted RBP22.68■■□□□ 1.22
CCDC188-201ENST00000439765 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
CCDC188-201ENST00000439765 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
CCDC188-201ENST00000439765 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
CCDC188-201ENST00000439765 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
CCDC188-201ENST00000439765 DDX60Q8IY21 1712 aaKnown RBP22.67■■□□□ 1.22
CCDC188-201ENST00000439765 C21orf2O43822 256 aa22.67■■□□□ 1.22
CCDC188-201ENST00000439765 SLFN5Q08AF3 891 aa22.67■■□□□ 1.22
CCDC188-201ENST00000439765 NTSR2O95665 410 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 TCIRG1Q13488 830 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 PARP10Q53GL7 1025 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 PRPF40BQ6NWY9 871 aaKnown RBP22.66■■□□□ 1.22
CCDC188-201ENST00000439765 RIC3Q7Z5B4 369 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 WDR90Q96KV7 1748 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 ERFEQ4G0M1 354 aa22.66■■□□□ 1.22
CCDC188-201ENST00000439765 RBM46Q8TBY0 533 aaKnown RBP22.66■■□□□ 1.22
CCDC188-201ENST00000439765 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 SOGA3Q5TF21 947 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 G2E3Q7L622 706 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
CCDC188-201ENST00000439765 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
CCDC188-201ENST00000439765 NPR1P16066 1061 aa22.64■■□□□ 1.21
CCDC188-201ENST00000439765 GLTPD2A6NH11 291 aa22.63■■□□□ 1.21
CCDC188-201ENST00000439765 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
CCDC188-201ENST00000439765 TAOK3Q9H2K8 898 aa22.63■■□□□ 1.21
CCDC188-201ENST00000439765 FLIIQ13045 1269 aa22.62■■□□□ 1.21
CCDC188-201ENST00000439765 C7orf43Q8WVR3 580 aa22.62■■□□□ 1.21
CCDC188-201ENST00000439765 ZNF219Q9P2Y4 722 aaPredicted RBP22.62■■□□□ 1.21
CCDC188-201ENST00000439765 MAP3K2Q9Y2U5 619 aa22.62■■□□□ 1.21
CCDC188-201ENST00000439765 C16orf71Q8IYS4 520 aaPredicted RBP22.61■■□□□ 1.21
CCDC188-201ENST00000439765 MYD88Q99836 296 aa22.61■■□□□ 1.21
CCDC188-201ENST00000439765 ISCA1Q9BUE6 129 aa22.61■■□□□ 1.21
CCDC188-201ENST00000439765 RRAGCQ9HB90 399 aa22.61■■□□□ 1.21
CCDC188-201ENST00000439765 PI4KAP2A4QPH2 592 aa22.6■■□□□ 1.21
CCDC188-201ENST00000439765 PI4KAP1Q8N8J0 262 aa22.6■■□□□ 1.21
CCDC188-201ENST00000439765 FKBP5Q13451 457 aaPredicted RBP22.6■■□□□ 1.21
CCDC188-201ENST00000439765 CRY2Q49AN0 593 aa22.6■■□□□ 1.21
CCDC188-201ENST00000439765 TRMT112Q9UI30 125 aaKnown RBP22.6■■□□□ 1.21
CCDC188-201ENST00000439765 APLP1P51693 650 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 FSTL1Q12841 308 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 KSR2Q6VAB6 950 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 TRMT2AQ8IZ69 625 aaKnown RBP22.59■■□□□ 1.21
CCDC188-201ENST00000439765 SYNE4Q8N205 404 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
CCDC188-201ENST00000439765 SCN4AP35499 1836 aa22.59■■□□□ 1.21
CCDC188-201ENST00000439765 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
CCDC188-201ENST00000439765 TAF1P21675 1872 aa22.58■■□□□ 1.2
CCDC188-201ENST00000439765 MYH3P11055 1940 aa22.57■■□□□ 1.2
CCDC188-201ENST00000439765 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
CCDC188-201ENST00000439765 VEGFAP15692 232 aaPredicted RBP22.57■■□□□ 1.2
CCDC188-201ENST00000439765 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
CCDC188-201ENST00000439765 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
CCDC188-201ENST00000439765 C3orf67Q6ZVT6 689 aa22.57■■□□□ 1.2
CCDC188-201ENST00000439765 FAM89AQ96GI7 184 aa22.56■■□□□ 1.2
CCDC188-201ENST00000439765 SNED1Q8TER0 1413 aa22.56■■□□□ 1.2
CCDC188-201ENST00000439765 HCLS1P14317 486 aaPredicted RBP22.55■■□□□ 1.2
CCDC188-201ENST00000439765 DPY19L2Q6NUT2 758 aa22.55■■□□□ 1.2
CCDC188-201ENST00000439765 BCL2L13Q9BXK5 485 aa22.55■■□□□ 1.2
CCDC188-201ENST00000439765 NEXNQ0ZGT2 675 aa22.54■■□□□ 1.2
CCDC188-201ENST00000439765 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
CCDC188-201ENST00000439765 IGKV5-2P06315 115 aa22.54■■□□□ 1.2
CCDC188-201ENST00000439765 TRIM28Q13263 835 aaKnown RBP22.54■■□□□ 1.2
CCDC188-201ENST00000439765 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
CCDC188-201ENST00000439765 POTECB2RU33 542 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 F6X3S4 739 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 HOXA10P31260 410 aaPredicted RBP22.53■■□□□ 1.2
CCDC188-201ENST00000439765 FKBP4Q02790 459 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCDC188-201ENST00000439765 CWF19L2Q2TBE0 894 aaKnown RBP22.53■■□□□ 1.2
CCDC188-201ENST00000439765 RTKN2Q8IZC4 609 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 SMC1BQ8NDV3 1235 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
CCDC188-201ENST00000439765 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms