RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
NOD1-206ENST00000434755 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 NBPF14Q5TI25 921 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 CCDC191Q8NCU4 936 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 NACAP1Q9BZK3 213 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
NOD1-206ENST00000434755 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
NOD1-206ENST00000434755 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 RPGRQ92834 1020 aaKnown RBP12.64□□□□□ -0.39
NOD1-206ENST00000434755 MEIS3Q99687 375 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
NOD1-206ENST00000434755 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 MST1RQ04912 1400 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 MRE11P49959 708 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 UTP14AQ9BVJ6 771 aaKnown RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 CPDO75976 1380 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 TTC41PQ6P2S7 1318 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 TSHZ3Q63HK5 1081 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 PDE4CQ08493 712 aa12.63□□□□□ -0.39
NOD1-206ENST00000434755 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
NOD1-206ENST00000434755 CRB1P82279 1406 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
NOD1-206ENST00000434755 TPM4P67936 248 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 ARID3AQ99856 593 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
NOD1-206ENST00000434755 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
NOD1-206ENST00000434755 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
NOD1-206ENST00000434755 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
NOD1-206ENST00000434755 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
NOD1-206ENST00000434755 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
NOD1-206ENST00000434755 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 TRAK2O60296 914 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 UQCRFS1P1P0C7P4 283 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
NOD1-206ENST00000434755 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
NOD1-206ENST00000434755 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
NOD1-206ENST00000434755 TPD52L1Q16890 204 aaPredicted RBP12.61□□□□□ -0.39
NOD1-206ENST00000434755 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 MCM4P33991 863 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 PDE1AP54750 535 aa12.61□□□□□ -0.39
NOD1-206ENST00000434755 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
NOD1-206ENST00000434755 RHPN1Q8TCX5 695 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 SH2B1Q9NRF2 756 aaPredicted RBP12.6□□□□□ -0.39
NOD1-206ENST00000434755 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 KDRP35968 1356 aa12.6□□□□□ -0.39
NOD1-206ENST00000434755 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
NOD1-206ENST00000434755 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
NOD1-206ENST00000434755 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
NOD1-206ENST00000434755 MYO5BQ9ULV0 1848 aa12.59□□□□□ -0.39
NOD1-206ENST00000434755 FIBPO43427 364 aa12.58□□□□□ -0.39
NOD1-206ENST00000434755 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.39
NOD1-206ENST00000434755 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
NOD1-206ENST00000434755 STK32BQ9NY57 414 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 ZSCAN29Q8IWY8 852 aaPredicted RBP12.58□□□□□ -0.4
NOD1-206ENST00000434755 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.4
NOD1-206ENST00000434755 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
NOD1-206ENST00000434755 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 BAG6P46379 1132 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 NUP133Q8WUM0 1156 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 PIBF1Q8WXW3 757 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 HMG20BQ9P0W2 317 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 SDSP20132 328 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 TDO2P48775 406 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
NOD1-206ENST00000434755 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
NOD1-206ENST00000434755 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
NOD1-206ENST00000434755 LARP6Q9BRS8 491 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms