RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CCDC191Q8NCU4 936 aa23.88■■□□□ 1.41
VRK2-205ENST00000432057 EAF2Q96CJ1 260 aaPredicted RBP23.88■■□□□ 1.41
VRK2-205ENST00000432057 GPATCH3Q96I76 525 aa23.88■■□□□ 1.41
VRK2-205ENST00000432057 JCADQ9P266 1359 aa23.88■■□□□ 1.41
VRK2-205ENST00000432057 FOXO4P98177 505 aa23.87■■□□□ 1.41
VRK2-205ENST00000432057 RABEP1Q15276 862 aa23.87■■□□□ 1.41
VRK2-205ENST00000432057 KIF6Q6ZMV9 814 aa23.87■■□□□ 1.41
VRK2-205ENST00000432057 LMBR1LQ6UX01 489 aa23.87■■□□□ 1.41
VRK2-205ENST00000432057 CCDC8Q9H0W5 538 aaPredicted RBP23.87■■□□□ 1.41
VRK2-205ENST00000432057 CYP19A1P11511 503 aaPredicted RBP23.86■■□□□ 1.41
VRK2-205ENST00000432057 MARCH10Q8NA82 808 aaPredicted RBP23.86■■□□□ 1.41
VRK2-205ENST00000432057 ISCA1Q9BUE6 129 aa23.86■■□□□ 1.41
VRK2-205ENST00000432057 TLR7Q9NYK1 1049 aaKnown RBP23.86■■□□□ 1.41
VRK2-205ENST00000432057 IL25Q9H293 177 aa23.85■■□□□ 1.41
VRK2-205ENST00000432057 MYH3P11055 1940 aa23.85■■□□□ 1.41
VRK2-205ENST00000432057 A0A0G2JS52 829 aa23.85■■□□□ 1.41
VRK2-205ENST00000432057 ANO2Q9NQ90 1003 aa23.85■■□□□ 1.41
VRK2-205ENST00000432057 CHMP3Q9Y3E7 222 aa23.85■■□□□ 1.41
VRK2-205ENST00000432057 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
VRK2-205ENST00000432057 TCIRG1Q13488 830 aa23.84■■□□□ 1.41
VRK2-205ENST00000432057 ACSBG1Q96GR2 724 aa23.84■■□□□ 1.41
VRK2-205ENST00000432057 RREB1Q92766 1687 aa23.84■■□□□ 1.41
VRK2-205ENST00000432057 K7ELQ4 463 aaPredicted RBP23.83■■□□□ 1.41
VRK2-205ENST00000432057 BARGINQ6ZT62 677 aa23.83■■□□□ 1.41
VRK2-205ENST00000432057 ZBTB1Q9Y2K1 713 aa23.83■■□□□ 1.41
VRK2-205ENST00000432057 MAP3K15Q6ZN16 1313 aa23.83■■□□□ 1.41
VRK2-205ENST00000432057 ARXQ96QS3 562 aa23.83■■□□□ 1.4
VRK2-205ENST00000432057 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
VRK2-205ENST00000432057 TFCP2Q12800 502 aa23.81■■□□□ 1.4
VRK2-205ENST00000432057 MYT1Q01538 1121 aa23.8■■□□□ 1.4
VRK2-205ENST00000432057 C8orf37Q96NL8 207 aa23.8■■□□□ 1.4
VRK2-205ENST00000432057 MYH14Q7Z406 1995 aaKnown RBP23.8■■□□□ 1.4
VRK2-205ENST00000432057 BCL9LQ86UU0 1499 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 COL5A3P25940 1745 aaPredicted RBP23.79■■□□□ 1.4
VRK2-205ENST00000432057 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 SGSM2O43147 1006 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 TRIM28Q13263 835 aaKnown RBP23.79■■□□□ 1.4
VRK2-205ENST00000432057 HLFQ16534 295 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 TNNI3KQ59H18 835 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 GIGYF2Q6Y7W6 1299 aaKnown RBP23.79■■□□□ 1.4
VRK2-205ENST00000432057 CHMP5Q9NZZ3 219 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 FPGT-TNNI3KV9GXZ4 949 aa23.79■■□□□ 1.4
VRK2-205ENST00000432057 MCCP23508 829 aa23.78■■□□□ 1.4
VRK2-205ENST00000432057 PALD1Q9ULE6 856 aa23.78■■□□□ 1.4
VRK2-205ENST00000432057 DDIT3P35638 169 aa23.77■■□□□ 1.4
VRK2-205ENST00000432057 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
VRK2-205ENST00000432057 CWC27Q6UX04 472 aaKnown RBP23.77■■□□□ 1.4
VRK2-205ENST00000432057 EVI5LQ96CN4 794 aa23.77■■□□□ 1.4
VRK2-205ENST00000432057 DIAPH3Q9NSV4 1193 aa23.77■■□□□ 1.4
VRK2-205ENST00000432057 DBNLQ9UJU6 430 aaKnown RBP23.77■■□□□ 1.4
VRK2-205ENST00000432057 PCCAP05165 728 aaPredicted RBP23.76■■□□□ 1.39
VRK2-205ENST00000432057 GPTP24298 496 aa23.76■■□□□ 1.39
VRK2-205ENST00000432057 NGLY1Q96IV0 654 aa23.76■■□□□ 1.39
VRK2-205ENST00000432057 BOLA2Q9H3K6 86 aa23.76■■□□□ 1.39
VRK2-205ENST00000432057 FOXD4L1Q9NU39 408 aa23.76■■□□□ 1.39
VRK2-205ENST00000432057 ATG9AQ7Z3C6 839 aa23.75■■□□□ 1.39
VRK2-205ENST00000432057 RAD50Q92878 1312 aa23.75■■□□□ 1.39
VRK2-205ENST00000432057 HSP90AA1P07900 732 aaKnown RBP23.75■■□□□ 1.39
VRK2-205ENST00000432057 IL6STP40189 918 aaPredicted RBP23.75■■□□□ 1.39
VRK2-205ENST00000432057 FAM89AQ96GI7 184 aa23.75■■□□□ 1.39
VRK2-205ENST00000432057 ZNF594Q96JF6 807 aaPredicted RBP23.75■■□□□ 1.39
VRK2-205ENST00000432057 ST18O60284 1047 aa23.74■■□□□ 1.39
VRK2-205ENST00000432057 HSPA1LP34931 641 aa23.74■■□□□ 1.39
VRK2-205ENST00000432057 VPS72Q15906 364 aa23.74■■□□□ 1.39
VRK2-205ENST00000432057 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 EPB41L2O43491 1005 aaKnown RBP23.73■■□□□ 1.39
VRK2-205ENST00000432057 HSP90AB3PQ58FF7 597 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 NLRP10Q86W26 655 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 ZBTB38Q8NAP3 1195 aaPredicted RBP23.73■■□□□ 1.39
VRK2-205ENST00000432057 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
VRK2-205ENST00000432057 PALLDQ8WX93 1383 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 ANAPC15P60006 121 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 DZIP3Q86Y13 1208 aaKnown RBP23.73■■□□□ 1.39
VRK2-205ENST00000432057 DBNDD2Q9BQY9 259 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
VRK2-205ENST00000432057 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
VRK2-205ENST00000432057 SIK1P57059 783 aa23.72■■□□□ 1.39
VRK2-205ENST00000432057 LRRC24Q50LG9 513 aa23.72■■□□□ 1.39
VRK2-205ENST00000432057 ZNF609O15014 1411 aa23.72■■□□□ 1.39
VRK2-205ENST00000432057 BCORQ6W2J9 1755 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 THSD7AQ9UPZ6 1657 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 HSPA4P34932 840 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 RUFY2Q8WXA3 655 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 PLA2G12BQ9BX93 195 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 CCDC87Q9NVE4 849 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 CDHR2Q9BYE9 1310 aa23.71■■□□□ 1.39
VRK2-205ENST00000432057 EYA2O00167 538 aa23.7■■□□□ 1.39
VRK2-205ENST00000432057 KCNQ2O43526 872 aa23.7■■□□□ 1.39
VRK2-205ENST00000432057 IL15P40933 162 aaPredicted RBP23.7■■□□□ 1.39
VRK2-205ENST00000432057 ITPK1Q13572 414 aa23.7■■□□□ 1.39
VRK2-205ENST00000432057 INTS5Q6P9B9 1019 aaKnown RBP23.7■■□□□ 1.39
VRK2-205ENST00000432057 SYNE4Q8N205 404 aa23.7■■□□□ 1.39
VRK2-205ENST00000432057 ATP5JP18859 108 aa23.7■■□□□ 1.38
VRK2-205ENST00000432057 CRKLP46109 303 aaKnown RBP23.7■■□□□ 1.38
VRK2-205ENST00000432057 IL17RAQ96F46 866 aa23.7■■□□□ 1.38
VRK2-205ENST00000432057 BTAF1O14981 1849 aa23.69■■□□□ 1.38
VRK2-205ENST00000432057 ERVV-1B6SEH8 477 aa23.69■■□□□ 1.38
VRK2-205ENST00000432057 NEK4P51957 841 aa23.69■■□□□ 1.38
VRK2-205ENST00000432057 CCDC85AQ96PX6 553 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms