RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 ARHGAP23Q9P227 1491 aa16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 MPHOSPH10O00566 681 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
SYNGAP1-203ENST00000428982 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 MED14O60244 1454 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 PPP2R5AQ15172 486 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 TMED8Q6PL24 325 aaPredicted RBP16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 RILPL2Q969X0 211 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 FILIP1Q7Z7B0 1213 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 UBXN4Q92575 508 aa16.93■□□□□ 0.3
SYNGAP1-203ENST00000428982 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 CYP2C19P33261 490 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 NEK4P51957 841 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 HOMER1Q86YM7 354 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 ARHGEF28Q8N1W1 1705 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 IFT172Q9UG01 1749 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 MYOM1P52179 1685 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 UBR1Q8IWV7 1749 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 GYS2P54840 703 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 RUFY2Q8WXA3 655 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 SYTL4Q96C24 671 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 EYA1Q99502 592 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 CXorf56Q9H5V9 222 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 RRP15Q9Y3B9 282 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 CCDC183Q5T5S1 534 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 ARHGEF10O15013 1369 aa16.92■□□□□ 0.3
SYNGAP1-203ENST00000428982 SUFUQ9UMX1 484 aa16.91■□□□□ 0.3
SYNGAP1-203ENST00000428982 KIF2AO00139 706 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-203ENST00000428982 ELF2Q15723 593 aa16.91■□□□□ 0.3
SYNGAP1-203ENST00000428982 TPM1P09493 284 aa16.91■□□□□ 0.3
SYNGAP1-203ENST00000428982 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-203ENST00000428982 TRIM66O15016 1216 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 ABCC4O15439 1325 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 KDM4AO75164 1064 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-203ENST00000428982 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.3
SYNGAP1-203ENST00000428982 CTIFO43310 598 aaKnown RBP16.89■□□□□ 0.3
SYNGAP1-203ENST00000428982 SKIDA1Q1XH10 827 aa16.89■□□□□ 0.3
SYNGAP1-203ENST00000428982 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.3
SYNGAP1-203ENST00000428982 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 HSP90B2PQ58FF3 399 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 CCDC192P0DO97 292 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 ADAMTS2O95450 1211 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 CABP4P57796 275 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
SYNGAP1-203ENST00000428982 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 CLSTN1O94985 981 aa16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 PTGS1P23219 599 aa16.88■□□□□ 0.29
SYNGAP1-203ENST00000428982 CCDC186Q7Z3E2 898 aa16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 FAM212AQ96EL1 285 aa16.87■□□□□ 0.29
SYNGAP1-203ENST00000428982 LIG1P18858 919 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 BIRC2Q13490 618 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 DONSONQ9NYP3 566 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 MIS18AQ9NYP9 233 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 CPS1P31327 1500 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 ANAPC15P60006 121 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
SYNGAP1-203ENST00000428982 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 MTHFSDQ2M296 383 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-203ENST00000428982 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms