RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
TFRC-204ENST00000421258 PDE4DIPQ5VU43 2346 aa17.35■□□□□ 0.37
TFRC-204ENST00000421258 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
TFRC-204ENST00000421258 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
TFRC-204ENST00000421258 TPTE2Q6XPS3 522 aa17.35■□□□□ 0.37
TFRC-204ENST00000421258 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
TFRC-204ENST00000421258 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
TFRC-204ENST00000421258 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
TFRC-204ENST00000421258 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
TFRC-204ENST00000421258 ZIC5Q96T25 663 aa17.33■□□□□ 0.36
TFRC-204ENST00000421258 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
TFRC-204ENST00000421258 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
TFRC-204ENST00000421258 ALDH1B1P30837 517 aa17.32■□□□□ 0.36
TFRC-204ENST00000421258 DGKZQ13574 1117 aa17.32■□□□□ 0.36
TFRC-204ENST00000421258 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
TFRC-204ENST00000421258 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
TFRC-204ENST00000421258 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
TFRC-204ENST00000421258 CIAPIN1Q6FI81 312 aa17.31■□□□□ 0.36
TFRC-204ENST00000421258 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
TFRC-204ENST00000421258 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
TFRC-204ENST00000421258 MCM10Q7L590 875 aa17.31■□□□□ 0.36
TFRC-204ENST00000421258 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
TFRC-204ENST00000421258 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
TFRC-204ENST00000421258 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
TFRC-204ENST00000421258 MAP2K2P36507 400 aa17.3■□□□□ 0.36
TFRC-204ENST00000421258 DLK2Q6UY11 383 aa17.3■□□□□ 0.36
TFRC-204ENST00000421258 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
TFRC-204ENST00000421258 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
TFRC-204ENST00000421258 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
TFRC-204ENST00000421258 AOC3Q16853 763 aa17.29■□□□□ 0.36
TFRC-204ENST00000421258 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
TFRC-204ENST00000421258 GPTP24298 496 aa17.28■□□□□ 0.36
TFRC-204ENST00000421258 SOX10P56693 466 aa17.28■□□□□ 0.36
TFRC-204ENST00000421258 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
TFRC-204ENST00000421258 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
TFRC-204ENST00000421258 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
TFRC-204ENST00000421258 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
TFRC-204ENST00000421258 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
TFRC-204ENST00000421258 SHTN1A0MZ66 631 aa17.27■□□□□ 0.36
TFRC-204ENST00000421258 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
TFRC-204ENST00000421258 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
TFRC-204ENST00000421258 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
TFRC-204ENST00000421258 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
TFRC-204ENST00000421258 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
TFRC-204ENST00000421258 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
TFRC-204ENST00000421258 ADARB2Q9NS39 739 aaKnown RBP17.27■□□□□ 0.36
TFRC-204ENST00000421258 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
TFRC-204ENST00000421258 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
TFRC-204ENST00000421258 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
TFRC-204ENST00000421258 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
TFRC-204ENST00000421258 CA12O43570 354 aa17.25■□□□□ 0.35
TFRC-204ENST00000421258 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
TFRC-204ENST00000421258 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
TFRC-204ENST00000421258 CXCL9Q07325 125 aa17.25■□□□□ 0.35
TFRC-204ENST00000421258 CC2D2BQ6DHV5 1058 aa17.25■□□□□ 0.35
TFRC-204ENST00000421258 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
TFRC-204ENST00000421258 NUP98P52948 1817 aa17.24■□□□□ 0.35
TFRC-204ENST00000421258 RGL2O15211 777 aa17.23■□□□□ 0.35
TFRC-204ENST00000421258 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
TFRC-204ENST00000421258 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
TFRC-204ENST00000421258 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
TFRC-204ENST00000421258 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 RAD17O75943 681 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 NTSR2O95665 410 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
TFRC-204ENST00000421258 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 CRAMP1Q96RY5 1269 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
TFRC-204ENST00000421258 HUNKP57058 714 aa17.2■□□□□ 0.34
TFRC-204ENST00000421258 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
TFRC-204ENST00000421258 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
TFRC-204ENST00000421258 ABCC4O15439 1325 aa17.2■□□□□ 0.34
TFRC-204ENST00000421258 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
TFRC-204ENST00000421258 MYL6BP14649 208 aa17.19■□□□□ 0.34
TFRC-204ENST00000421258 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
TFRC-204ENST00000421258 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
TFRC-204ENST00000421258 FAM155AB1AL88 458 aaPredicted RBP17.18■□□□□ 0.34
TFRC-204ENST00000421258 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
TFRC-204ENST00000421258 NOGQ13253 232 aa17.18■□□□□ 0.34
TFRC-204ENST00000421258 BCL2L13Q9BXK5 485 aa17.18■□□□□ 0.34
TFRC-204ENST00000421258 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
TFRC-204ENST00000421258 MKI67P46013 3256 aaKnown RBP17.18■□□□□ 0.34
TFRC-204ENST00000421258 YDJCA8MPS7 323 aa17.17■□□□□ 0.34
TFRC-204ENST00000421258 EGFRP00533 1210 aa17.17■□□□□ 0.34
TFRC-204ENST00000421258 KIF6Q6ZMV9 814 aa17.17■□□□□ 0.34
TFRC-204ENST00000421258 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
TFRC-204ENST00000421258 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
TFRC-204ENST00000421258 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
TFRC-204ENST00000421258 GRIPAP1Q4V328 841 aa17.16■□□□□ 0.34
TFRC-204ENST00000421258 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
TFRC-204ENST00000421258 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
TFRC-204ENST00000421258 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
TFRC-204ENST00000421258 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
TFRC-204ENST00000421258 ADM5C9JUS6 153 aa17.15■□□□□ 0.34
TFRC-204ENST00000421258 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
TFRC-204ENST00000421258 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.342e-13■□□□□ 9.8
TFRC-204ENST00000421258 KIF23Q02241 960 aaPredicted RBP17.15■□□□□ 0.34
TFRC-204ENST00000421258 DPP8Q6V1X1 898 aaPredicted RBP17.15■□□□□ 0.34
TFRC-204ENST00000421258 SAMD7Q7Z3H4 446 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms