RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 TOMM22Q9NS69 142 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 GTF2A1P52655 376 aaPredicted RBP17.31■□□□□ 0.36
CHRD-204ENST00000420973 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 TNNT1P13805 278 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
CHRD-204ENST00000420973 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 BTG4Q9NY30 223 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 MCM5P33992 734 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
CHRD-204ENST00000420973 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
CHRD-204ENST00000420973 A0A087WZG4 1122 aa17.29■□□□□ 0.36
CHRD-204ENST00000420973 CAPN2P17655 700 aa17.29■□□□□ 0.36
CHRD-204ENST00000420973 ANKRD13DQ6ZTN6 518 aa17.29■□□□□ 0.36
CHRD-204ENST00000420973 C17orf53Q8N3J3 647 aaPredicted RBP17.29■□□□□ 0.36
CHRD-204ENST00000420973 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
CHRD-204ENST00000420973 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
CHRD-204ENST00000420973 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
CHRD-204ENST00000420973 CPA1P15085 419 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 GPTP24298 496 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 SSFA2P28290 1259 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHRD-204ENST00000420973 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
CHRD-204ENST00000420973 GRM8O00222 908 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 RSPH14Q9UHP6 348 aa17.28■□□□□ 0.36
CHRD-204ENST00000420973 ST18O60284 1047 aa17.27■□□□□ 0.36
CHRD-204ENST00000420973 SLC20A2Q08357 652 aa17.27■□□□□ 0.36
CHRD-204ENST00000420973 TSPYL1Q9H0U9 437 aa17.27■□□□□ 0.36
CHRD-204ENST00000420973 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.36
CHRD-204ENST00000420973 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
CHRD-204ENST00000420973 KIF1BPQ96EK5 621 aa17.27■□□□□ 0.36
CHRD-204ENST00000420973 MCCP23508 829 aa17.27■□□□□ 0.35
CHRD-204ENST00000420973 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.35
CHRD-204ENST00000420973 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
CHRD-204ENST00000420973 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 DDX21Q9NR30 783 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHRD-204ENST00000420973 OGFRQ9NZT2 677 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
CHRD-204ENST00000420973 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
CHRD-204ENST00000420973 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
CHRD-204ENST00000420973 GABPB1Q06547 395 aaPredicted RBP17.25■□□□□ 0.35
CHRD-204ENST00000420973 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
CHRD-204ENST00000420973 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
CHRD-204ENST00000420973 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRD-204ENST00000420973 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
CHRD-204ENST00000420973 PSEN1P49768 467 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 PKP1Q13835 747 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 FEZ1Q99689 392 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
CHRD-204ENST00000420973 IL25Q9H293 177 aa17.23■□□□□ 0.35
CHRD-204ENST00000420973 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
CHRD-204ENST00000420973 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHRD-204ENST00000420973 EPHA10Q5JZY3 1008 aa17.23■□□□□ 0.35
CHRD-204ENST00000420973 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
CHRD-204ENST00000420973 KIF2CQ99661 725 aa17.23■□□□□ 0.35
CHRD-204ENST00000420973 ADCY9O60503 1353 aa17.23■□□□□ 0.35
CHRD-204ENST00000420973 ZNF526Q8TF50 670 aaPredicted RBP17.23■□□□□ 0.35
CHRD-204ENST00000420973 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 XRN1Q8IZH2 1706 aaKnown RBP17.22■□□□□ 0.35
CHRD-204ENST00000420973 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 IL2RBP14784 551 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 CHMLP26374 656 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 RABEP1Q15276 862 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 ZNF594Q96JF6 807 aaPredicted RBP17.22■□□□□ 0.35
CHRD-204ENST00000420973 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 LMBR1LQ6UX01 489 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
CHRD-204ENST00000420973 GEMIN8Q9NWZ8 242 aaKnown RBP17.22■□□□□ 0.35
CHRD-204ENST00000420973 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 IGKV5-2P06315 115 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
CHRD-204ENST00000420973 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 KLHL40Q2TBA0 621 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 GORABQ5T7V8 394 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
CHRD-204ENST00000420973 MMP14P50281 582 aa17.2■□□□□ 0.34
CHRD-204ENST00000420973 CHGBP05060 677 aa17.2■□□□□ 0.34
CHRD-204ENST00000420973 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
CHRD-204ENST00000420973 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
CHRD-204ENST00000420973 FMN2Q9NZ56 1722 aa17.2■□□□□ 0.34
CHRD-204ENST00000420973 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
CHRD-204ENST00000420973 TTC12Q9H892 705 aaPredicted RBP17.19■□□□□ 0.34
CHRD-204ENST00000420973 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
CHRD-204ENST00000420973 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
CHRD-204ENST00000420973 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
CHRD-204ENST00000420973 MST1RQ04912 1400 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms