RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
A1CF-208ENST00000414883 C3orf67Q6ZVT6 689 aa14.2□□□□□ -0.14
A1CF-208ENST00000414883 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
A1CF-208ENST00000414883 DBF4Q9UBU7 674 aaPredicted RBP14.2□□□□□ -0.14
A1CF-208ENST00000414883 SNED1Q8TER0 1413 aa14.2□□□□□ -0.14
A1CF-208ENST00000414883 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
A1CF-208ENST00000414883 ELL2O00472 640 aaPredicted RBP14.19□□□□□ -0.14
A1CF-208ENST00000414883 C21orf2O43822 256 aa14.19□□□□□ -0.14
A1CF-208ENST00000414883 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
A1CF-208ENST00000414883 NYXQ9GZU5 481 aa14.19□□□□□ -0.14
A1CF-208ENST00000414883 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
A1CF-208ENST00000414883 NPHP1O15259 732 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 NPR1P16066 1061 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 PLBD2Q8NHP8 589 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
A1CF-208ENST00000414883 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
A1CF-208ENST00000414883 CACNA1FO60840 1977 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 SLC10A5Q5PT55 438 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 SLC51AQ86UW1 340 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 FAM9BQ8IZU0 186 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 ZNF526Q8TF50 670 aaPredicted RBP14.17□□□□□ -0.14
A1CF-208ENST00000414883 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 PHAXQ9H814 394 aaKnown RBP14.17□□□□□ -0.14
A1CF-208ENST00000414883 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
A1CF-208ENST00000414883 TAF1P21675 1872 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 PCNTO95613 3336 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 KIF3CO14782 793 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
A1CF-208ENST00000414883 OLFM4Q6UX06 510 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 ANKRD13DQ6ZTN6 518 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
A1CF-208ENST00000414883 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
A1CF-208ENST00000414883 ZNF521Q96K83 1311 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 LTBP3Q9NS15 1303 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 LMNB1P20700 586 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 HSP90AB3PQ58FF7 597 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
A1CF-208ENST00000414883 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
A1CF-208ENST00000414883 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
A1CF-208ENST00000414883 SALL2Q9Y467 1007 aaPredicted RBP14.15□□□□□ -0.14
A1CF-208ENST00000414883 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.15
A1CF-208ENST00000414883 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
A1CF-208ENST00000414883 GTF2E1P29083 439 aaPredicted RBP14.14□□□□□ -0.15
A1CF-208ENST00000414883 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
A1CF-208ENST00000414883 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
A1CF-208ENST00000414883 COL4A1P02462 1669 aa14.14□□□□□ -0.15
A1CF-208ENST00000414883 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
A1CF-208ENST00000414883 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
A1CF-208ENST00000414883 ZNF428Q96B54 188 aa14.13□□□□□ -0.15
A1CF-208ENST00000414883 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
A1CF-208ENST00000414883 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
A1CF-208ENST00000414883 TWISTNBQ3B726 338 aaPredicted RBP14.12□□□□□ -0.15
A1CF-208ENST00000414883 CRAMP1Q96RY5 1269 aa14.12□□□□□ -0.15
A1CF-208ENST00000414883 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
A1CF-208ENST00000414883 COL4A5P29400 1685 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 VAMP4O75379 141 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 ALDH1B1P30837 517 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 SOGA3Q5TF21 947 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 G2E3Q7L622 706 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 TAOK3Q9H2K8 898 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
A1CF-208ENST00000414883 SH3TC1Q8TE82 1336 aa14.11□□□□□ -0.15
A1CF-208ENST00000414883 TCERG1O14776 1098 aaKnown RBP14.1□□□□□ -0.15
A1CF-208ENST00000414883 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
A1CF-208ENST00000414883 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
A1CF-208ENST00000414883 LRRC37AA6NMS7 1700 aa14.1□□□□□ -0.15
A1CF-208ENST00000414883 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
A1CF-208ENST00000414883 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
A1CF-208ENST00000414883 EXOSC9Q06265 439 aaKnown RBP14.09□□□□□ -0.15
A1CF-208ENST00000414883 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
A1CF-208ENST00000414883 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
A1CF-208ENST00000414883 FAM89AQ96GI7 184 aa14.09□□□□□ -0.15
A1CF-208ENST00000414883 ABCC4O15439 1325 aa14.09□□□□□ -0.15
A1CF-208ENST00000414883 GLTPD2A6NH11 291 aa14.08□□□□□ -0.16
A1CF-208ENST00000414883 POTECB2RU33 542 aa14.08□□□□□ -0.16
A1CF-208ENST00000414883 IGKV5-2P06315 115 aa14.08□□□□□ -0.16
A1CF-208ENST00000414883 RIC3Q7Z5B4 369 aa14.08□□□□□ -0.16
A1CF-208ENST00000414883 RBM17Q96I25 401 aaKnown RBP14.08□□□□□ -0.16
A1CF-208ENST00000414883 METTL22Q9BUU2 404 aaPredicted RBP14.08□□□□□ -0.16
A1CF-208ENST00000414883 PI4KAP2A4QPH2 592 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 PI4KAP1Q8N8J0 262 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 PSMD1Q99460 953 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 MYD88Q99836 296 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 ZNF277Q9NRM2 450 aaPredicted RBP14.07□□□□□ -0.16
A1CF-208ENST00000414883 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 LTBP1Q14766 1721 aa14.07□□□□□ -0.16
A1CF-208ENST00000414883 MYH3P11055 1940 aa14.06□□□□□ -0.16
A1CF-208ENST00000414883 DUOX1Q9NRD9 1551 aa14.06□□□□□ -0.16
A1CF-208ENST00000414883 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
A1CF-208ENST00000414883 SF3B3Q15393 1217 aaKnown RBP14.06□□□□□ -0.16
A1CF-208ENST00000414883 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms