RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 LINS1Q8NG48 757 aa38.83■■■■□ 3.81
CSNK1E-206ENST00000413574 UTP14AQ9BVJ6 771 aaKnown RBP38.83■■■■□ 3.81
CSNK1E-206ENST00000413574 ZKSCAN2Q63HK3 967 aa38.82■■■■□ 3.81
CSNK1E-206ENST00000413574 TPTE2Q6XPS3 522 aa38.82■■■■□ 3.81
CSNK1E-206ENST00000413574 SYNE4Q8N205 404 aa38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 CCDC191Q8NCU4 936 aa38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 CWC25Q9NXE8 425 aaPredicted RBP38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 TRMT112Q9UI30 125 aaKnown RBP38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 ERFEQ4G0M1 354 aa38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 RTL5Q5HYW3 569 aaPredicted RBP38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 CLUAP1Q96AJ1 413 aa38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 NYXQ9GZU5 481 aa38.81■■■■□ 3.8
CSNK1E-206ENST00000413574 JARID2Q92833 1246 aaPredicted RBP38.8■■■■□ 3.8
CSNK1E-206ENST00000413574 ANKRD31Q8N7Z5 1873 aa38.8■■■■□ 3.8
CSNK1E-206ENST00000413574 KIF13BQ9NQT8 1826 aa38.79■■■■□ 3.8
CSNK1E-206ENST00000413574 PLIN1O60240 522 aa38.79■■■■□ 3.8
CSNK1E-206ENST00000413574 GTF2E1P29083 439 aaPredicted RBP38.79■■■■□ 3.8
CSNK1E-206ENST00000413574 C10orf71Q711Q0 1435 aa38.79■■■■□ 3.8
CSNK1E-206ENST00000413574 FAM89AQ96GI7 184 aa38.78■■■■□ 3.8
CSNK1E-206ENST00000413574 IBTKQ9P2D0 1353 aaPredicted RBP38.78■■■■□ 3.8
CSNK1E-206ENST00000413574 SRCIN1Q9C0H9 1055 aa38.78■■■■□ 3.8
CSNK1E-206ENST00000413574 N4BP2Q86UW6 1770 aaPredicted RBP38.78■■■■□ 3.8
CSNK1E-206ENST00000413574 PXDNLA1KZ92 1463 aa38.77■■■■□ 3.8
CSNK1E-206ENST00000413574 ABCC12Q96J65 1359 aa38.77■■■■□ 3.8
CSNK1E-206ENST00000413574 FHDC1Q9C0D6 1143 aaPredicted RBP38.77■■■■□ 3.8
CSNK1E-206ENST00000413574 ST5P78524 1137 aa38.76■■■■□ 3.8
CSNK1E-206ENST00000413574 GCKRQ14397 625 aa38.76■■■■□ 3.8
CSNK1E-206ENST00000413574 ABCC4O15439 1325 aa38.75■■■■□ 3.79
CSNK1E-206ENST00000413574 SH3TC1Q8TE82 1336 aa38.73■■■■□ 3.79
CSNK1E-206ENST00000413574 TNRC6CQ9HCJ0 1690 aaKnown RBP38.73■■■■□ 3.79
CSNK1E-206ENST00000413574 ZBTB38Q8NAP3 1195 aaPredicted RBP38.72■■■■□ 3.79
CSNK1E-206ENST00000413574 DDX60Q8IY21 1712 aaKnown RBP38.72■■■■□ 3.79
CSNK1E-206ENST00000413574 ALDH1L1O75891 902 aa38.71■■■■□ 3.79
CSNK1E-206ENST00000413574 PCCAP05165 728 aaPredicted RBP38.71■■■■□ 3.79
CSNK1E-206ENST00000413574 CD2APQ9Y5K6 639 aa38.71■■■■□ 3.79
CSNK1E-206ENST00000413574 GOLGB1Q14789 3259 aaKnown RBP38.7■■■■□ 3.79
CSNK1E-206ENST00000413574 RLBP1P12271 317 aa38.7■■■■□ 3.79
CSNK1E-206ENST00000413574 HCLS1P14317 486 aaPredicted RBP38.7■■■■□ 3.79
CSNK1E-206ENST00000413574 CCT4P50991 539 aaKnown RBP38.7■■■■□ 3.79
CSNK1E-206ENST00000413574 BRIP1Q9BX63 1249 aa38.69■■■■□ 3.78
CSNK1E-206ENST00000413574 KIAA1551Q9HCM1 1747 aa38.69■■■■□ 3.78
CSNK1E-206ENST00000413574 RNF123Q5XPI4 1314 aa38.69■■■■□ 3.78
CSNK1E-206ENST00000413574 UBE3BQ7Z3V4 1068 aa38.68■■■■□ 3.78
CSNK1E-206ENST00000413574 DZIP1LQ8IYY4 767 aaKnown RBP38.68■■■■□ 3.78
CSNK1E-206ENST00000413574 NLGN2Q8NFZ4 835 aa38.68■■■■□ 3.78
CSNK1E-206ENST00000413574 H7C1W4 665 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 FTSJ3Q8IY81 847 aaKnown RBP38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 TMEM57Q8N5G2 664 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 SYT17Q9BSW7 474 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 LAMB2P55268 1798 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 INTS3Q68E01 1043 aaKnown RBP38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 C3orf67Q6ZVT6 689 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 PANK1Q8TE04 598 aa38.67■■■■□ 3.78
CSNK1E-206ENST00000413574 COL11A2P13942 1736 aaPredicted RBP38.66■■■■□ 3.78
CSNK1E-206ENST00000413574 IRS4O14654 1257 aaPredicted RBP38.66■■■■□ 3.78
CSNK1E-206ENST00000413574 SLC10A5Q5PT55 438 aa38.66■■■■□ 3.78
CSNK1E-206ENST00000413574 C9orf78Q9NZ63 289 aaPredicted RBP38.65■■■■□ 3.78
CSNK1E-206ENST00000413574 GRM8O00222 908 aa38.64■■■■□ 3.78
CSNK1E-206ENST00000413574 CHRNA5P30532 468 aa38.64■■■■□ 3.78
CSNK1E-206ENST00000413574 CASP7P55210 303 aa38.64■■■■□ 3.78
CSNK1E-206ENST00000413574 A0A0G2JLW4 131 aa38.63■■■■□ 3.77
CSNK1E-206ENST00000413574 PDE6BP35913 854 aa38.63■■■■□ 3.77
CSNK1E-206ENST00000413574 C20orf194Q5TEA3 1177 aa38.63■■■■□ 3.77
CSNK1E-206ENST00000413574 GOLGA6L2Q8N9W4 650 aaPredicted RBP38.63■■■■□ 3.77
CSNK1E-206ENST00000413574 NBPF7P0C2Y1 421 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-206ENST00000413574 USP44Q9H0E7 712 aa38.62■■■■□ 3.77
CSNK1E-206ENST00000413574 DPEP1P16444 411 aa38.61■■■■□ 3.77
CSNK1E-206ENST00000413574 RRP1P56182 461 aaKnown RBP38.61■■■■□ 3.77
CSNK1E-206ENST00000413574 C2CD5Q86YS7 1000 aa38.61■■■■□ 3.77
CSNK1E-206ENST00000413574 RIC1Q4ADV7 1423 aa38.6■■■■□ 3.77
CSNK1E-206ENST00000413574 CDHR2Q9BYE9 1310 aa38.6■■■■□ 3.77
CSNK1E-206ENST00000413574 TGFB2P61812 414 aa38.6■■■■□ 3.77
CSNK1E-206ENST00000413574 NLRP3Q96P20 1036 aa38.6■■■■□ 3.77
CSNK1E-206ENST00000413574 MYH3P11055 1940 aa38.58■■■■□ 3.77
CSNK1E-206ENST00000413574 DLEC1Q9Y238 1755 aa38.57■■■■□ 3.77
CSNK1E-206ENST00000413574 KLRG2A4D1S0 409 aaPredicted RBP38.57■■■■□ 3.77
CSNK1E-206ENST00000413574 ITPRIPQ8IWB1 547 aa38.57■■■■□ 3.77
CSNK1E-206ENST00000413574 WWC3Q9ULE0 1092 aa38.57■■■■□ 3.77
CSNK1E-206ENST00000413574 UTYO14607 1347 aa38.57■■■■□ 3.76
CSNK1E-206ENST00000413574 H0YIN7 160 aa38.56■■■■□ 3.76
CSNK1E-206ENST00000413574 KCNA3P22001 575 aa38.56■■■■□ 3.76
CSNK1E-206ENST00000413574 SUPT16HQ9Y5B9 1047 aaKnown RBP38.56■■■■□ 3.76
CSNK1E-206ENST00000413574 MEIS3Q99687 375 aa38.56■■■■□ 3.76
CSNK1E-206ENST00000413574 PDE8AO60658 829 aa38.55■■■■□ 3.76
CSNK1E-206ENST00000413574 SRGNP10124 158 aa38.55■■■■□ 3.76
CSNK1E-206ENST00000413574 MS4A1P11836 297 aa38.55■■■■□ 3.76
CSNK1E-206ENST00000413574 BRCA1P38398 1863 aaKnown RBP38.54■■■■□ 3.76
CSNK1E-206ENST00000413574 CRY2Q49AN0 593 aa38.53■■■■□ 3.76
CSNK1E-206ENST00000413574 SUCLG2Q96I99 432 aa38.53■■■■□ 3.76
CSNK1E-206ENST00000413574 COG6Q9Y2V7 657 aa38.53■■■■□ 3.76
CSNK1E-206ENST00000413574 CACNA1SQ13698 1873 aa38.53■■■■□ 3.76
CSNK1E-206ENST00000413574 TAF1P21675 1872 aa38.53■■■■□ 3.76
CSNK1E-206ENST00000413574 CCDC85AQ96PX6 553 aaPredicted RBP38.52■■■■□ 3.76
CSNK1E-206ENST00000413574 EPHA10Q5JZY3 1008 aa38.52■■■■□ 3.76
CSNK1E-206ENST00000413574 ZNF622Q969S3 477 aaKnown RBP eCLIP38.52■■■■□ 3.765e-7■■□□□ 14.1
CSNK1E-206ENST00000413574 PDE3AQ14432 1141 aa38.51■■■■□ 3.76
CSNK1E-206ENST00000413574 KAZALD1Q96I82 304 aa38.51■■■■□ 3.76
CSNK1E-206ENST00000413574 PLA2G12BQ9BX93 195 aa38.5■■■■□ 3.75
CSNK1E-206ENST00000413574 HSP90B1P14625 803 aaKnown RBP38.49■■■■□ 3.75
CSNK1E-206ENST00000413574 CTSWP56202 376 aa38.49■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms