RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PRIM1P49642 420 aaKnown RBP25.19■■□□□ 1.62
USP39-203ENST00000409470 ARXQ96QS3 562 aa25.19■■□□□ 1.62
USP39-203ENST00000409470 FOXO4P98177 505 aa25.19■■□□□ 1.62
USP39-203ENST00000409470 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
USP39-203ENST00000409470 ST18O60284 1047 aa25.18■■□□□ 1.62
USP39-203ENST00000409470 TCIRG1Q13488 830 aa25.17■■□□□ 1.62
USP39-203ENST00000409470 TLR7Q9NYK1 1049 aaKnown RBP25.17■■□□□ 1.62
USP39-203ENST00000409470 A0A0G2JS52 829 aa25.16■■□□□ 1.62
USP39-203ENST00000409470 ISCA1Q9BUE6 129 aa25.16■■□□□ 1.62
USP39-203ENST00000409470 TJP1Q07157 1748 aa25.16■■□□□ 1.62
USP39-203ENST00000409470 EVI5LQ96CN4 794 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 SLC4A9Q96Q91 983 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 IL25Q9H293 177 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 DIAPH3Q9NSV4 1193 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 FOXD4L1Q9NU39 408 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 SPATA31A5Q5VU36 1347 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 SPATA31A7Q8IWB4 1347 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 SGSM2O43147 1006 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 CYP19A1P11511 503 aaPredicted RBP25.15■■□□□ 1.62
USP39-203ENST00000409470 TFCP2Q12800 502 aa25.15■■□□□ 1.62
USP39-203ENST00000409470 EPB41L2O43491 1005 aaKnown RBP25.14■■□□□ 1.62
USP39-203ENST00000409470 CWC27Q6UX04 472 aaKnown RBP25.14■■□□□ 1.62
USP39-203ENST00000409470 DOT1LQ8TEK3 1739 aa25.14■■□□□ 1.62
USP39-203ENST00000409470 DDIT3P35638 169 aa25.13■■□□□ 1.61
USP39-203ENST00000409470 DEKP35659 375 aaKnown RBP25.13■■□□□ 1.61
USP39-203ENST00000409470 UBAP1LF5GYI3 381 aa25.13■■□□□ 1.61
USP39-203ENST00000409470 ANAPC15P60006 121 aa25.13■■□□□ 1.61
USP39-203ENST00000409470 RUFY2Q8WXA3 655 aa25.13■■□□□ 1.61
USP39-203ENST00000409470 TNNI3KQ59H18 835 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 FPGT-TNNI3KV9GXZ4 949 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 MAP3K15Q6ZN16 1313 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 TRIM28Q13263 835 aaKnown RBP25.12■■□□□ 1.61
USP39-203ENST00000409470 KIAA1211Q6ZU35 1233 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 BOLA2Q9H3K6 86 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 PALD1Q9ULE6 856 aa25.12■■□□□ 1.61
USP39-203ENST00000409470 CIZ1Q9ULV3 898 aaPredicted RBP25.12■■□□□ 1.61
USP39-203ENST00000409470 NWD2Q9ULI1 1742 aa25.11■■□□□ 1.61
USP39-203ENST00000409470 SLIT2O94813 1529 aa25.1■■□□□ 1.61
USP39-203ENST00000409470 ACSBG1Q96GR2 724 aa25.1■■□□□ 1.61
USP39-203ENST00000409470 ZBTB1Q9Y2K1 713 aa25.1■■□□□ 1.61
USP39-203ENST00000409470 NEK4P51957 841 aa25.1■■□□□ 1.61
USP39-203ENST00000409470 MARCH10Q8NA82 808 aaPredicted RBP25.1■■□□□ 1.61
USP39-203ENST00000409470 GIGYF2Q6Y7W6 1299 aaKnown RBP25.09■■□□□ 1.61
USP39-203ENST00000409470 BARGINQ6ZT62 677 aa25.09■■□□□ 1.61
USP39-203ENST00000409470 DBNLQ9UJU6 430 aaKnown RBP25.08■■□□□ 1.61
USP39-203ENST00000409470 RAD50Q92878 1312 aa25.08■■□□□ 1.61
USP39-203ENST00000409470 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.08■■□□□ 1.61
USP39-203ENST00000409470 HSPA4P34932 840 aa25.08■■□□□ 1.61
USP39-203ENST00000409470 HIP1O00291 1037 aa25.07■■□□□ 1.6
USP39-203ENST00000409470 PCCAP05165 728 aaPredicted RBP25.07■■□□□ 1.6
USP39-203ENST00000409470 HLFQ16534 295 aa25.07■■□□□ 1.6
USP39-203ENST00000409470 HSP90AB3PQ58FF7 597 aa25.07■■□□□ 1.6
USP39-203ENST00000409470 LSG1Q9H089 658 aaKnown RBP25.07■■□□□ 1.6
USP39-203ENST00000409470 ZBTB38Q8NAP3 1195 aaPredicted RBP25.06■■□□□ 1.6
USP39-203ENST00000409470 FAM89AQ96GI7 184 aa25.06■■□□□ 1.6
USP39-203ENST00000409470 FSD1Q9BTV5 496 aa25.06■■□□□ 1.6
USP39-203ENST00000409470 ATP5JP18859 108 aa25.05■■□□□ 1.6
USP39-203ENST00000409470 GPTP24298 496 aa25.05■■□□□ 1.6
USP39-203ENST00000409470 IL15P40933 162 aaPredicted RBP25.05■■□□□ 1.6
USP39-203ENST00000409470 ATG9AQ7Z3C6 839 aa25.05■■□□□ 1.6
USP39-203ENST00000409470 IL6STP40189 918 aaPredicted RBP25.05■■□□□ 1.6
USP39-203ENST00000409470 IL17RAQ96F46 866 aa25.05■■□□□ 1.6
USP39-203ENST00000409470 ZNF594Q96JF6 807 aaPredicted RBP25.05■■□□□ 1.6
USP39-203ENST00000409470 CCDC57Q2TAC2 916 aa25.04■■□□□ 1.6
USP39-203ENST00000409470 DBNDD2Q9BQY9 259 aa25.04■■□□□ 1.6
USP39-203ENST00000409470 EYA2O00167 538 aa25.03■■□□□ 1.6
USP39-203ENST00000409470 MCM2P49736 904 aa25.03■■□□□ 1.6
USP39-203ENST00000409470 NGLY1Q96IV0 654 aa25.03■■□□□ 1.6
USP39-203ENST00000409470 C8orf37Q96NL8 207 aa25.03■■□□□ 1.6
USP39-203ENST00000409470 MCM4P33991 863 aa25.03■■□□□ 1.6
USP39-203ENST00000409470 DZIP3Q86Y13 1208 aaKnown RBP25.03■■□□□ 1.6
USP39-203ENST00000409470 ATP6V1AP38606 617 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 LRRC24Q50LG9 513 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 NLRP10Q86W26 655 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 CIAO1O76071 339 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 NMIQ13287 307 aaPredicted RBP25.02■■□□□ 1.6
USP39-203ENST00000409470 NEUROD6Q96NK8 337 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 PLA2G12BQ9BX93 195 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 TBC1D2BQ9UPU7 963 aa25.02■■□□□ 1.6
USP39-203ENST00000409470 RAB3GAP1Q15042 981 aa25.01■■□□□ 1.59
USP39-203ENST00000409470 FAM98CQ17RN3 349 aaKnown RBP25.01■■□□□ 1.59
USP39-203ENST00000409470 FAM227BQ96M60 508 aa25.01■■□□□ 1.59
USP39-203ENST00000409470 GPR108Q9NPR9 543 aa25.01■■□□□ 1.59
USP39-203ENST00000409470 JCADQ9P266 1359 aa25.01■■□□□ 1.59
USP39-203ENST00000409470 ERVV-1B6SEH8 477 aa25■■□□□ 1.59
USP39-203ENST00000409470 UPF3BQ9BZI7 483 aaKnown RBP25■■□□□ 1.59
USP39-203ENST00000409470 LOC102724428A0A0B4J2F2 783 aa25■■□□□ 1.59
USP39-203ENST00000409470 SIK1P57059 783 aa25■■□□□ 1.59
USP39-203ENST00000409470 TNPO1Q92973 898 aaKnown RBP25■■□□□ 1.59
USP39-203ENST00000409470 CCDC85AQ96PX6 553 aaPredicted RBP25■■□□□ 1.59
USP39-203ENST00000409470 SNX14Q9Y5W7 946 aa25■■□□□ 1.59
USP39-203ENST00000409470 CDHR2Q9BYE9 1310 aa24.99■■□□□ 1.59
USP39-203ENST00000409470 TAF7LQ5H9L4 462 aa24.99■■□□□ 1.59
USP39-203ENST00000409470 EDC3Q96F86 508 aaKnown RBP24.99■■□□□ 1.59
USP39-203ENST00000409470 CCDC87Q9NVE4 849 aa24.99■■□□□ 1.59
USP39-203ENST00000409470 PTH1RQ03431 593 aa24.98■■□□□ 1.59
USP39-203ENST00000409470 GSE1Q14687 1217 aa24.98■■□□□ 1.59
USP39-203ENST00000409470 DNAJC2Q99543 621 aaKnown RBP24.98■■□□□ 1.59
USP39-203ENST00000409470 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
USP39-203ENST00000409470 IFIT5Q13325 482 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms