RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 LINS1Q8NG48 757 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 ARHGAP45Q92619 1136 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 FRAT1Q92837 279 aaPredicted RBP22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 ANKRD31Q8N7Z5 1873 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 PXDNLA1KZ92 1463 aa22.06■■□□□ 1.12
CSNK1D-204ENST00000398519 ABCC12Q96J65 1359 aa22.05■■□□□ 1.12
CSNK1D-204ENST00000398519 CWC25Q9NXE8 425 aaPredicted RBP22.05■■□□□ 1.12
CSNK1D-204ENST00000398519 CD2APQ9Y5K6 639 aa22.05■■□□□ 1.12
CSNK1D-204ENST00000398519 ST5P78524 1137 aa22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 ERFEQ4G0M1 354 aa22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 API5Q9BZZ5 524 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-204ENST00000398519 N4BP2Q86UW6 1770 aaPredicted RBP22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 TRIM27P14373 513 aa22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 ATF7IPQ6VMQ6 1270 aa22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 SYT17Q9BSW7 474 aa22.03■■□□□ 1.12
CSNK1D-204ENST00000398519 SH3TC1Q8TE82 1336 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 GCKRQ14397 625 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 SYNE4Q8N205 404 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 NLGN2Q8NFZ4 835 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 FAM89AQ96GI7 184 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 BRIP1Q9BX63 1249 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 TNNQ9UQP3 1299 aa22.02■■□□□ 1.12
CSNK1D-204ENST00000398519 ZKSCAN2Q63HK3 967 aa22.01■■□□□ 1.11
CSNK1D-204ENST00000398519 ZBTB38Q8NAP3 1195 aaPredicted RBP22.01■■□□□ 1.11
CSNK1D-204ENST00000398519 SRCIN1Q9C0H9 1055 aa22.01■■□□□ 1.11
CSNK1D-204ENST00000398519 ABCC4O15439 1325 aa22.01■■□□□ 1.11
CSNK1D-204ENST00000398519 RIC1Q4ADV7 1423 aa22■■□□□ 1.11
CSNK1D-204ENST00000398519 RTL5Q5HYW3 569 aaPredicted RBP22■■□□□ 1.11
CSNK1D-204ENST00000398519 DDX60Q8IY21 1712 aaKnown RBP22■■□□□ 1.11
CSNK1D-204ENST00000398519 COL11A2P13942 1736 aaPredicted RBP22■■□□□ 1.11
CSNK1D-204ENST00000398519 PCCAP05165 728 aaPredicted RBP21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 GOLGB1Q14789 3259 aaKnown RBP21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 TGFB2P61812 414 aa21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 SLC10A5Q5PT55 438 aa21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 LAMB2P55268 1798 aa21.99■■□□□ 1.11
CSNK1D-204ENST00000398519 PDE6BP35913 854 aa21.98■■□□□ 1.11
CSNK1D-204ENST00000398519 CLUAP1Q96AJ1 413 aa21.98■■□□□ 1.11
CSNK1D-204ENST00000398519 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
CSNK1D-204ENST00000398519 CHRNA5P30532 468 aa21.97■■□□□ 1.11
CSNK1D-204ENST00000398519 DLEC1Q9Y238 1755 aa21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 KLRG2A4D1S0 409 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 H7C1W4 665 aa21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 DPEP1P16444 411 aa21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 CCT4P50991 539 aaKnown RBP21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 C3orf67Q6ZVT6 689 aa21.96■■□□□ 1.11
CSNK1D-204ENST00000398519 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.11
CSNK1D-204ENST00000398519 CASP7P55210 303 aa21.95■■□□□ 1.11
CSNK1D-204ENST00000398519 UBE3BQ7Z3V4 1068 aa21.95■■□□□ 1.11
CSNK1D-204ENST00000398519 C2CD5Q86YS7 1000 aa21.95■■□□□ 1.11
CSNK1D-204ENST00000398519 CDHR2Q9BYE9 1310 aa21.95■■□□□ 1.1
CSNK1D-204ENST00000398519 GRM8O00222 908 aa21.95■■□□□ 1.1
CSNK1D-204ENST00000398519 PLIN1O60240 522 aa21.95■■□□□ 1.1
CSNK1D-204ENST00000398519 KCNA3P22001 575 aa21.95■■□□□ 1.1
CSNK1D-204ENST00000398519 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-204ENST00000398519 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
CSNK1D-204ENST00000398519 BRCA1P38398 1863 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 H0YIN7 160 aa21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 SRGNP10124 158 aa21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 RLBP1P12271 317 aa21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 DZIP1LQ8IYY4 767 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 PDZRN3Q9UPQ7 1066 aa21.93■■□□□ 1.1
CSNK1D-204ENST00000398519 TMEM57Q8N5G2 664 aa21.92■■□□□ 1.1
CSNK1D-204ENST00000398519 UTYO14607 1347 aa21.92■■□□□ 1.1
CSNK1D-204ENST00000398519 NBPF7P0C2Y1 421 aaPredicted RBP21.91■■□□□ 1.1
CSNK1D-204ENST00000398519 USP44Q9H0E7 712 aa21.91■■□□□ 1.1
CSNK1D-204ENST00000398519 PDE8AO60658 829 aa21.9■■□□□ 1.1
CSNK1D-204ENST00000398519 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-204ENST00000398519 PANK1Q8TE04 598 aa21.9■■□□□ 1.1
CSNK1D-204ENST00000398519 MASTLQ96GX5 879 aa21.9■■□□□ 1.1
CSNK1D-204ENST00000398519 WWC3Q9ULE0 1092 aa21.9■■□□□ 1.1
CSNK1D-204ENST00000398519 NPR1P16066 1061 aa21.89■■□□□ 1.09
CSNK1D-204ENST00000398519 STYK1Q6J9G0 422 aa21.89■■□□□ 1.09
CSNK1D-204ENST00000398519 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.89■■□□□ 1.09
CSNK1D-204ENST00000398519 PLA2G12BQ9BX93 195 aa21.89■■□□□ 1.09
CSNK1D-204ENST00000398519 MYH3P11055 1940 aa21.88■■□□□ 1.09
CSNK1D-204ENST00000398519 SF3B3Q15393 1217 aaKnown RBP21.88■■□□□ 1.09
CSNK1D-204ENST00000398519 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.099e-8■□□□□ 10
CSNK1D-204ENST00000398519 PIM2Q9P1W9 311 aa21.88■■□□□ 1.09
CSNK1D-204ENST00000398519 RRP1P56182 461 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 CTSWP56202 376 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 UTRNP46939 3433 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 MS4A1P11836 297 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 C20orf194Q5TEA3 1177 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 KAZALD1Q96I82 304 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 SUCLG2Q96I99 432 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms