RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 BCORQ6W2J9 1755 aa26.49■■□□□ 1.83
CPNE1-204ENST00000397443 TRIM28Q13263 835 aaKnown RBP26.49■■□□□ 1.83
CPNE1-204ENST00000397443 ZNF34Q8IZ26 560 aa26.49■■□□□ 1.83
CPNE1-204ENST00000397443 FAM89AQ96GI7 184 aa26.49■■□□□ 1.83
CPNE1-204ENST00000397443 RGPD3A6NKT7 1758 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-204ENST00000397443 RGPD4Q7Z3J3 1758 aa26.49■■□□□ 1.83
CPNE1-204ENST00000397443 PNMA6EA0A0J9YXQ4 647 aa26.48■■□□□ 1.83
CPNE1-204ENST00000397443 BCL2L12Q9HB09 334 aa26.48■■□□□ 1.83
CPNE1-204ENST00000397443 C4AP0C0L4 1744 aa26.48■■□□□ 1.83
CPNE1-204ENST00000397443 BICC1Q9H694 974 aaKnown RBP26.47■■□□□ 1.83
CPNE1-204ENST00000397443 H7C1W4 665 aa26.47■■□□□ 1.83
CPNE1-204ENST00000397443 SSFA2P28290 1259 aa26.47■■□□□ 1.83
CPNE1-204ENST00000397443 SYNE4Q8N205 404 aa26.47■■□□□ 1.83
CPNE1-204ENST00000397443 AKT1S1Q96B36 256 aa26.47■■□□□ 1.83
CPNE1-204ENST00000397443 KAZALD1Q96I82 304 aa26.47■■□□□ 1.83
CPNE1-204ENST00000397443 USP42Q9H9J4 1324 aaKnown RBP26.46■■□□□ 1.83
CPNE1-204ENST00000397443 MSH5O43196 834 aa26.46■■□□□ 1.83
CPNE1-204ENST00000397443 ADRA2BP18089 450 aa26.46■■□□□ 1.83
CPNE1-204ENST00000397443 HMGB2P26583 209 aaKnown RBP26.46■■□□□ 1.83
CPNE1-204ENST00000397443 EPHA10Q5JZY3 1008 aa26.46■■□□□ 1.83
CPNE1-204ENST00000397443 CLEC4GQ6UXB4 293 aa26.46■■□□□ 1.83
CPNE1-204ENST00000397443 TRMT112Q9UI30 125 aaKnown RBP26.46■■□□□ 1.83
CPNE1-204ENST00000397443 SCN7AQ01118 1682 aa26.46■■□□□ 1.83
CPNE1-204ENST00000397443 CASP7P55210 303 aa26.45■■□□□ 1.83
CPNE1-204ENST00000397443 TBC1D9BQ66K14 1250 aa26.45■■□□□ 1.83
CPNE1-204ENST00000397443 PPP1R42Q7Z4L9 355 aa26.45■■□□□ 1.83
CPNE1-204ENST00000397443 SKAP1Q86WV1 359 aa26.45■■□□□ 1.83
CPNE1-204ENST00000397443 HDAC5Q9UQL6 1122 aa26.45■■□□□ 1.83
CPNE1-204ENST00000397443 ATP8B2P98198 1209 aa26.45■■□□□ 1.82
CPNE1-204ENST00000397443 SUSD4Q5VX71 490 aa26.45■■□□□ 1.82
CPNE1-204ENST00000397443 SRGAP3O43295 1099 aa26.44■■□□□ 1.82
CPNE1-204ENST00000397443 ANO8Q9HCE9 1232 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-204ENST00000397443 IBTKQ9P2D0 1353 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-204ENST00000397443 HMMRO75330 724 aa26.43■■□□□ 1.82
CPNE1-204ENST00000397443 ZBTB38Q8NAP3 1195 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-204ENST00000397443 PCCAP05165 728 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-204ENST00000397443 BCL11AQ9H165 835 aa26.42■■□□□ 1.82
CPNE1-204ENST00000397443 PARP10Q53GL7 1025 aa26.41■■□□□ 1.82
CPNE1-204ENST00000397443 APBB1O00213 710 aa26.41■■□□□ 1.82
CPNE1-204ENST00000397443 UTP14AQ9BVJ6 771 aaKnown RBP26.41■■□□□ 1.82
CPNE1-204ENST00000397443 CHMP3Q9Y3E7 222 aa26.41■■□□□ 1.82
CPNE1-204ENST00000397443 TUBGCP6Q96RT7 1819 aa26.4■■□□□ 1.82
CPNE1-204ENST00000397443 COL23A1Q86Y22 540 aaPredicted RBP26.39■■□□□ 1.82
CPNE1-204ENST00000397443 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.82
CPNE1-204ENST00000397443 SETDB2Q96T68 719 aa26.39■■□□□ 1.82
CPNE1-204ENST00000397443 GYS1P13807 737 aa26.38■■□□□ 1.81
CPNE1-204ENST00000397443 LMBR1LQ6UX01 489 aa26.38■■□□□ 1.81
CPNE1-204ENST00000397443 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
CPNE1-204ENST00000397443 IRS4O14654 1257 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-204ENST00000397443 FOXO4P98177 505 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 CCDC125Q86Z20 511 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 CCDC85AQ96PX6 553 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-204ENST00000397443 EXOC6BQ9Y2D4 811 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 NTSR2O95665 410 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 SLC15A2Q16348 729 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 SMC5Q8IY18 1101 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 SSH3Q8TE77 659 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 PNPLA7Q6ZV29 1317 aa26.37■■□□□ 1.81
CPNE1-204ENST00000397443 HCLS1P14317 486 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-204ENST00000397443 DCTPP1Q9H773 170 aa26.36■■□□□ 1.81
CPNE1-204ENST00000397443 PDZRN3Q9UPQ7 1066 aa26.36■■□□□ 1.81
CPNE1-204ENST00000397443 SH3TC1Q8TE82 1336 aa26.36■■□□□ 1.81
CPNE1-204ENST00000397443 MTX1Q13505 466 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 POLA2Q14181 598 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 GCC1Q96CN9 775 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 RGL2O15211 777 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 GTF2E1P29083 439 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-204ENST00000397443 NFIXQ14938 502 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 ANKRD45Q5TZF3 282 aa26.35■■□□□ 1.81
CPNE1-204ENST00000397443 PA2G4Q9UQ80 394 aaKnown RBP26.35■■□□□ 1.81
CPNE1-204ENST00000397443 CDHR2Q9BYE9 1310 aa26.34■■□□□ 1.81
CPNE1-204ENST00000397443 NBPF5PQ86XG9 351 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-204ENST00000397443 RABL6Q3YEC7 729 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-204ENST00000397443 CCDC24Q8N4L8 307 aa26.33■■□□□ 1.81
CPNE1-204ENST00000397443 FLAD1Q8NFF5 587 aa26.33■■□□□ 1.81
CPNE1-204ENST00000397443 KLHDC4Q8TBB5 520 aa26.33■■□□□ 1.81
CPNE1-204ENST00000397443 NPHP1O15259 732 aa26.33■■□□□ 1.81
CPNE1-204ENST00000397443 SURF6O75683 361 aaKnown RBP26.33■■□□□ 1.81
CPNE1-204ENST00000397443 ERFEQ4G0M1 354 aa26.32■■□□□ 1.8
CPNE1-204ENST00000397443 RGS3P49796 1198 aa26.31■■□□□ 1.8
CPNE1-204ENST00000397443 UPF1Q92900 1129 aaKnown RBP eCLIP26.31■■□□□ 1.8
CPNE1-204ENST00000397443 MSL1Q68DK7 614 aa26.31■■□□□ 1.8
CPNE1-204ENST00000397443 LNPKQ9C0E8 428 aa26.31■■□□□ 1.8
CPNE1-204ENST00000397443 SIL1Q9H173 461 aa26.31■■□□□ 1.8
CPNE1-204ENST00000397443 PLA2G12BQ9BX93 195 aa26.3■■□□□ 1.8
CPNE1-204ENST00000397443 PDE8AO60658 829 aa26.29■■□□□ 1.8
CPNE1-204ENST00000397443 CTSWP56202 376 aa26.29■■□□□ 1.8
CPNE1-204ENST00000397443 OS9Q13438 667 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-204ENST00000397443 CARMIL3Q8ND23 1372 aa26.29■■□□□ 1.8
CPNE1-204ENST00000397443 SMARCA5O60264 1052 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-204ENST00000397443 FAM161AQ3B820 660 aa26.29■■□□□ 1.8
CPNE1-204ENST00000397443 NYXQ9GZU5 481 aa26.29■■□□□ 1.8
CPNE1-204ENST00000397443 NUCB1Q02818 461 aa26.28■■□□□ 1.8
CPNE1-204ENST00000397443 TPTE2Q6XPS3 522 aa26.28■■□□□ 1.8
CPNE1-204ENST00000397443 CHD1LQ86WJ1 897 aa26.27■■□□□ 1.8
CPNE1-204ENST00000397443 ZBTB47Q9UFB7 747 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-204ENST00000397443 COL24A1Q17RW2 1714 aa26.27■■□□□ 1.8
CPNE1-204ENST00000397443 TTLL11Q8NHH1 800 aa26.27■■□□□ 1.8
CPNE1-204ENST00000397443 MYH3P11055 1940 aa26.26■■□□□ 1.8
CPNE1-204ENST00000397443 ABCC12Q96J65 1359 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms