RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 C9orf78Q9NZ63 289 aaPredicted RBP23.48■■□□□ 1.35
AGAP3-202ENST00000397238 CTIFO43310 598 aaKnown RBP23.48■■□□□ 1.35
AGAP3-202ENST00000397238 SIL1Q9H173 461 aa23.48■■□□□ 1.35
AGAP3-202ENST00000397238 ECHDC1Q9NTX5 307 aa23.48■■□□□ 1.35
AGAP3-202ENST00000397238 CCDC144BQ3MJ40 725 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 FILIP1Q7Z7B0 1213 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 CCDC144CPQ8IYA2 1237 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 NMIQ13287 307 aaPredicted RBP23.47■■□□□ 1.35
AGAP3-202ENST00000397238 DNAAF4Q8WXU2 420 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 BOLA2Q9H3K6 86 aa23.47■■□□□ 1.35
AGAP3-202ENST00000397238 KCNQ3O43525 872 aa23.46■■□□□ 1.35
AGAP3-202ENST00000397238 SIRT1Q96EB6 747 aa23.46■■□□□ 1.35
AGAP3-202ENST00000397238 EPB41L2O43491 1005 aaKnown RBP23.46■■□□□ 1.35
AGAP3-202ENST00000397238 KCNA6P17658 529 aa23.46■■□□□ 1.35
AGAP3-202ENST00000397238 CCDC171Q6TFL3 1326 aa23.46■■□□□ 1.35
AGAP3-202ENST00000397238 BLOC1S2Q6QNY1 142 aa23.46■■□□□ 1.35
AGAP3-202ENST00000397238 THEMISQ8N1K5 641 aaPredicted RBP23.46■■□□□ 1.35
AGAP3-202ENST00000397238 CGNQ9P2M7 1197 aaKnown RBP23.45■■□□□ 1.34
AGAP3-202ENST00000397238 JAK2O60674 1132 aa23.45■■□□□ 1.34
AGAP3-202ENST00000397238 NECTIN1Q15223 517 aa23.45■■□□□ 1.34
AGAP3-202ENST00000397238 LEO1Q8WVC0 666 aaPredicted RBP23.45■■□□□ 1.34
AGAP3-202ENST00000397238 PTPRUQ92729 1446 aa23.45■■□□□ 1.34
AGAP3-202ENST00000397238 GOLGA6L19H0YKK7 550 aa23.44■■□□□ 1.34
AGAP3-202ENST00000397238 SMTNL1A8MU46 457 aa23.44■■□□□ 1.34
AGAP3-202ENST00000397238 KIF20AO95235 890 aa23.44■■□□□ 1.34
AGAP3-202ENST00000397238 ERCC4Q92889 916 aaPredicted RBP23.44■■□□□ 1.34
AGAP3-202ENST00000397238 USP27XA6NNY8 438 aa23.44■■□□□ 1.34
AGAP3-202ENST00000397238 FSD1Q9BTV5 496 aa23.44■■□□□ 1.34
AGAP3-202ENST00000397238 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 PLEKHG3A1L390 1219 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 SLC27A2O14975 620 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 HSP90AB4PQ58FF6 505 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 GPATCH3Q96I76 525 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 HSP90B1P14625 803 aaKnown RBP23.43■■□□□ 1.34
AGAP3-202ENST00000397238 CEP135Q66GS9 1140 aa23.43■■□□□ 1.34
AGAP3-202ENST00000397238 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
AGAP3-202ENST00000397238 SCAND2PQ9GZW5 306 aaPredicted RBP23.43■■□□□ 1.34
AGAP3-202ENST00000397238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
AGAP3-202ENST00000397238 CWF19L2Q2TBE0 894 aaKnown RBP23.42■■□□□ 1.34
AGAP3-202ENST00000397238 LGR6Q9HBX8 967 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 OGFRQ9NZT2 677 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 CCDC9Q9Y3X0 531 aaKnown RBP23.42■■□□□ 1.34
AGAP3-202ENST00000397238 H3BQV1 296 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 PDCP20941 246 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 BEND3Q5T5X7 828 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 IFFO2Q5TF58 517 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 LRRC2Q9BYS8 371 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 FLT4P35916 1363 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 EDC3Q96F86 508 aaKnown RBP23.42■■□□□ 1.34
AGAP3-202ENST00000397238 PGBD1Q96JS3 809 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 CTNNA3Q9UI47 895 aa23.42■■□□□ 1.34
AGAP3-202ENST00000397238 NAP1L2Q9ULW6 460 aaPredicted RBP23.42■■□□□ 1.34
AGAP3-202ENST00000397238 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
AGAP3-202ENST00000397238 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
AGAP3-202ENST00000397238 USP16Q9Y5T5 823 aa23.41■■□□□ 1.34
AGAP3-202ENST00000397238 A0A0D9SFI3 127 aa23.41■■□□□ 1.34
AGAP3-202ENST00000397238 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
AGAP3-202ENST00000397238 OVOS2A0A0J9YW53 1432 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 OVOS2Q6IE36 1432 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 PSMA5P28066 241 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 FGD1P98174 961 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 ABTB2Q8N961 1025 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 FEZ1Q99689 392 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 CLSTN2Q9H4D0 955 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 DDX19AQ9NUU7 478 aaKnown RBP23.4■■□□□ 1.34
AGAP3-202ENST00000397238 TLR7Q9NYK1 1049 aaKnown RBP23.4■■□□□ 1.34
AGAP3-202ENST00000397238 NDUFB9Q9Y6M9 179 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 TTC41PQ6P2S7 1318 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 PLA2G4DQ86XP0 818 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 IGSF1Q8N6C5 1336 aa23.4■■□□□ 1.34
AGAP3-202ENST00000397238 BECN2A8MW95 431 aa23.39■■□□□ 1.34
AGAP3-202ENST00000397238 AIMP1Q12904 312 aaKnown RBP23.39■■□□□ 1.34
AGAP3-202ENST00000397238 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.348e-6■■■□□ 15.4
AGAP3-202ENST00000397238 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
AGAP3-202ENST00000397238 TECPR2O15040 1411 aa23.39■■□□□ 1.33
AGAP3-202ENST00000397238 USP6P35125 1406 aa23.39■■□□□ 1.33
AGAP3-202ENST00000397238 ZNF215Q9UL58 517 aaPredicted RBP23.38■■□□□ 1.33
AGAP3-202ENST00000397238 LMOD2Q6P5Q4 547 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 PEAK1Q9H792 1746 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 MAP3K5Q99683 1374 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 C11orf57Q6ZUT1 292 aaPredicted RBP23.38■■□□□ 1.33
AGAP3-202ENST00000397238 BRF1Q92994 677 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
AGAP3-202ENST00000397238 SKILP12757 684 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 TAOK2Q9UL54 1235 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 MAP4K1Q92918 833 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 EAF2Q96CJ1 260 aaPredicted RBP23.37■■□□□ 1.33
AGAP3-202ENST00000397238 SBNO1A3KN83 1393 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 PTPN14Q15678 1187 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 PAXBP1Q9Y5B6 917 aa23.37■■□□□ 1.33
AGAP3-202ENST00000397238 CHGBP05060 677 aa23.36■■□□□ 1.33
AGAP3-202ENST00000397238 RNF20Q5VTR2 975 aa23.36■■□□□ 1.33
AGAP3-202ENST00000397238 ZNF589Q86UQ0 364 aaPredicted RBP23.36■■□□□ 1.33
AGAP3-202ENST00000397238 ERICH4A6NGS2 130 aa23.36■■□□□ 1.33
AGAP3-202ENST00000397238 G3BP1Q13283 466 aaKnown RBP eCLIP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms