RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
RTN4-205ENST00000394609 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
RTN4-205ENST00000394609 TSR3Q9UJK0 312 aaKnown RBP8.75□□□□□ -1.01
RTN4-205ENST00000394609 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
RTN4-205ENST00000394609 KDM6AO15550 1401 aaPredicted RBP8.75□□□□□ -1.01
RTN4-205ENST00000394609 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
RTN4-205ENST00000394609 MAP3K7O43318 606 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 KCNC4Q03721 635 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 AHDC1Q5TGY3 1603 aaPredicted RBP8.74□□□□□ -1.01
RTN4-205ENST00000394609 OVOS2A0A0G2JMS6 1433 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 PTPRCP08575 1304 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 ANXA1P04083 346 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 CABP4P57796 275 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 FLIIQ13045 1269 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 FKBP5Q13451 457 aaPredicted RBP8.74□□□□□ -1.01
RTN4-205ENST00000394609 ZNF790Q6PG37 636 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 CERKQ8TCT0 537 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 RWDD1Q9H446 243 aaPredicted RBP8.74□□□□□ -1.01
RTN4-205ENST00000394609 PHAXQ9H814 394 aaKnown RBP8.74□□□□□ -1.01
RTN4-205ENST00000394609 CHPF2Q9P2E5 772 aa8.74□□□□□ -1.01
RTN4-205ENST00000394609 GIGYF1O75420 1035 aaPredicted RBP8.73□□□□□ -1.01
RTN4-205ENST00000394609 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
RTN4-205ENST00000394609 INTS3Q68E01 1043 aaKnown RBP8.73□□□□□ -1.01
RTN4-205ENST00000394609 SOS1Q07889 1333 aaPredicted RBP8.73□□□□□ -1.01
RTN4-205ENST00000394609 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
RTN4-205ENST00000394609 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
RTN4-205ENST00000394609 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
RTN4-205ENST00000394609 RGS12O14924 1447 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 RGS3P49796 1198 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 WDR70Q9NW82 654 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 WBP1LQ9NX94 342 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 HOXB7P09629 217 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 ZNF496Q96IT1 587 aaPredicted RBP8.72□□□□□ -1.01
RTN4-205ENST00000394609 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
RTN4-205ENST00000394609 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
RTN4-205ENST00000394609 E2F4Q16254 413 aa8.71□□□□□ -1.01
RTN4-205ENST00000394609 PROSER3Q2NL68 480 aa8.71□□□□□ -1.01
RTN4-205ENST00000394609 TTC5Q8N0Z6 440 aa8.71□□□□□ -1.01
RTN4-205ENST00000394609 HDAC1Q13547 482 aaPredicted RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 MEIS3Q99687 375 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 CHMP4BQ9H444 224 aaKnown RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 COL16A1Q07092 1604 aaPredicted RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 PLEKHG2Q9H7P9 1386 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 HEG1Q9ULI3 1381 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 PHLPP1O60346 1717 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
RTN4-205ENST00000394609 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
RTN4-205ENST00000394609 PI4KAP2A4QPH2 592 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 PI4KAP1Q8N8J0 262 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 C8orf37Q96NL8 207 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
RTN4-205ENST00000394609 EXOC5O00471 708 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 MYL6BP14649 208 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 PIP4K2AP48426 406 aaPredicted RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 AIMP1Q12904 312 aaKnown RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 NGLY1Q96IV0 654 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 FMNL2Q96PY5 1086 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
RTN4-205ENST00000394609 NBPF26B4DH59 902 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 PRSS12P56730 875 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 PPP4CP60510 307 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 UBE2Q2Q8WVN8 375 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 DDRGK1Q96HY6 314 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 SPATA31A1Q5TZJ5 1347 aa8.68□□□□□ -1.02
RTN4-205ENST00000394609 COL14A1Q05707 1796 aaKnown RBP8.67□□□□□ -1.02
RTN4-205ENST00000394609 KDM3BQ7LBC6 1761 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 PKD1L3Q7Z443 1732 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 SMC5Q8IY18 1101 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 DNAAF4Q8WXU2 420 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 PIGBQ92521 554 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 DDX21Q9NR30 783 aaKnown RBP eCLIP8.67□□□□□ -1.02
RTN4-205ENST00000394609 HYPKQ9NX55 129 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 ADAMTS7Q9UKP4 1686 aa8.67□□□□□ -1.02
RTN4-205ENST00000394609 JCADQ9P266 1359 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
RTN4-205ENST00000394609 ASAP1Q9ULH1 1129 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 MRC1P22897 1456 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 HSPA1LP34931 641 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 UNC5CLQ8IV45 518 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 USP44Q9H0E7 712 aa8.66□□□□□ -1.02
RTN4-205ENST00000394609 ADCY9O60503 1353 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms