RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PI4K2BQ8TCG2 481 aa18.38■□□□□ 0.53
CCT4-201ENST00000394440 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
CCT4-201ENST00000394440 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
CCT4-201ENST00000394440 IL6STP40189 918 aaPredicted RBP18.38■□□□□ 0.53
CCT4-201ENST00000394440 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
CCT4-201ENST00000394440 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
CCT4-201ENST00000394440 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
CCT4-201ENST00000394440 ERICH6Q7L0X2 663 aa18.37■□□□□ 0.53
CCT4-201ENST00000394440 QTRT2Q9H974 415 aaKnown RBP18.37■□□□□ 0.53
CCT4-201ENST00000394440 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
CCT4-201ENST00000394440 SIK1P57059 783 aa18.37■□□□□ 0.53
CCT4-201ENST00000394440 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
CCT4-201ENST00000394440 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
CCT4-201ENST00000394440 KCNQ2O43526 872 aa18.36■□□□□ 0.53
CCT4-201ENST00000394440 BTAF1O14981 1849 aa18.36■□□□□ 0.53
CCT4-201ENST00000394440 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
CCT4-201ENST00000394440 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
CCT4-201ENST00000394440 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.531e-7■■□□□ 12.9
CCT4-201ENST00000394440 KLHDC4Q8TBB5 520 aa18.35■□□□□ 0.53
CCT4-201ENST00000394440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
CCT4-201ENST00000394440 MYH3P11055 1940 aa18.35■□□□□ 0.53
CCT4-201ENST00000394440 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
CCT4-201ENST00000394440 ITPK1Q13572 414 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
CCT4-201ENST00000394440 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
CCT4-201ENST00000394440 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 SLC4A3P48751 1232 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 EIF5P55010 431 aaKnown RBP18.34■□□□□ 0.53
CCT4-201ENST00000394440 HLFQ16534 295 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 LMBR1LQ6UX01 489 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 ATRNO75882 1429 aa18.34■□□□□ 0.53
CCT4-201ENST00000394440 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.53
CCT4-201ENST00000394440 A0A0G2JS52 829 aa18.33■□□□□ 0.52
CCT4-201ENST00000394440 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.52
CCT4-201ENST00000394440 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
CCT4-201ENST00000394440 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
CCT4-201ENST00000394440 SIL1Q9H173 461 aa18.33■□□□□ 0.52
CCT4-201ENST00000394440 BCORQ6W2J9 1755 aa18.33■□□□□ 0.52
CCT4-201ENST00000394440 CRKLP46109 303 aaKnown RBP18.32■□□□□ 0.52
CCT4-201ENST00000394440 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
CCT4-201ENST00000394440 KIF2CQ99661 725 aa18.32■□□□□ 0.52
CCT4-201ENST00000394440 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
CCT4-201ENST00000394440 GJD4Q96KN9 370 aaPredicted RBP18.31■□□□□ 0.52
CCT4-201ENST00000394440 PLA2G12BQ9BX93 195 aa18.31■□□□□ 0.52
CCT4-201ENST00000394440 TRPC5Q9UL62 973 aaPredicted RBP18.31■□□□□ 0.52
CCT4-201ENST00000394440 BECN1Q14457 450 aa18.31■□□□□ 0.52
CCT4-201ENST00000394440 AACSQ86V21 672 aa18.31■□□□□ 0.52
CCT4-201ENST00000394440 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
CCT4-201ENST00000394440 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
CCT4-201ENST00000394440 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
CCT4-201ENST00000394440 GLRX3O76003 335 aaKnown RBP18.3■□□□□ 0.52
CCT4-201ENST00000394440 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 CDHR2Q9BYE9 1310 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
CCT4-201ENST00000394440 CHMLP26374 656 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 UPF1Q92900 1129 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCT4-201ENST00000394440 LY75O60449 1722 aa18.3■□□□□ 0.52
CCT4-201ENST00000394440 ERC2O15083 957 aa18.29■□□□□ 0.52
CCT4-201ENST00000394440 ONECUT3O60422 494 aaPredicted RBP18.29■□□□□ 0.52
CCT4-201ENST00000394440 RILPL2Q969X0 211 aa18.29■□□□□ 0.52
CCT4-201ENST00000394440 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
CCT4-201ENST00000394440 DAXXQ9UER7 740 aaPredicted RBP18.29■□□□□ 0.52
CCT4-201ENST00000394440 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
CCT4-201ENST00000394440 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 REC8O95072 547 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 ARXQ96QS3 562 aa18.28■□□□□ 0.52
CCT4-201ENST00000394440 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.52
CCT4-201ENST00000394440 TAF1LQ8IZX4 1826 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 UBN2Q6ZU65 1347 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 GPTP24298 496 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.52
CCT4-201ENST00000394440 CSF1RP07333 972 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 TFCP2Q12800 502 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 CNTROBQ8N137 903 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 CCDC8Q9H0W5 538 aaPredicted RBP18.26■□□□□ 0.51
CCT4-201ENST00000394440 LAMB2P55268 1798 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
CCT4-201ENST00000394440 CAMTA2O94983 1202 aa18.25■□□□□ 0.51
CCT4-201ENST00000394440 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
CCT4-201ENST00000394440 MAP4K4O95819 1239 aaPredicted RBP18.25■□□□□ 0.51
CCT4-201ENST00000394440 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
CCT4-201ENST00000394440 SNX21Q969T3 373 aa18.25■□□□□ 0.51
CCT4-201ENST00000394440 CIAO1O76071 339 aa18.24■□□□□ 0.51
CCT4-201ENST00000394440 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
CCT4-201ENST00000394440 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
CCT4-201ENST00000394440 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
CCT4-201ENST00000394440 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
CCT4-201ENST00000394440 EYA2O00167 538 aa18.23■□□□□ 0.51
CCT4-201ENST00000394440 IL15P40933 162 aaPredicted RBP18.23■□□□□ 0.51
CCT4-201ENST00000394440 GPR108Q9NPR9 543 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms